CYTOMETER ANALYSIS CARTRIDGE OPTICAL CONFIGURATION [Para 1 ] This present invention is a continuation-in-part of U.S. Patent Application Number 10/612,664, filed on July 2, 2003, which claims the benefit of U.S. Provisional Application Number 60/404,876, filed August 21 , 2002. This present invention is also a continuation-in- part of U.S. Patent Application Number 10/304,773, filed November 26, 2002, which is a continuation-in-part of U.S. Patent Application Number 09/630,924, filed August 2, 2000, now U.S. Patent Number 6,597,438, and claims the benefit thereof. The above-mentioned patent documents are incorporated herein by reference. Background
[Para 2] The present invention generally relates to cytometery, and particularly to removable media of a cytometer. More particularly, the invention related to an improvement of the media. [Para 3] Over the past several decades there has been an ever increasing use of devices and systems that use, in one form or another, a removable media member. Some illustrative removable media members include, for example, removable or replaceable filters, removable ink and toner cartridges, removable data storage devices such as magnetic or optical disks, removable magnetic tape cartridges, removable memory sticks, and so forth.
[Para 4] A limitation of many of the existing systems is that the alignment tolerance between the inserted removable media member and the receiving device is often not very precise. In some cases, the receiving device simply includes a slot for receiving the removable
media member. In other cases, a more complex mechanical mechanism is provided, such as the mechanical mechanism used in a conventional video cassette recorder (VCR) for receiving VCR tapes. For some applications, the alignment tolerance that can be achieved using these existing systems is not adequate. [Para 5] Another limitation with many existing systems is that provisions are typically not made for including one or more electrical or optical devices on or in the removable media member. For some applications, however, it may be desirable to provide one or more electrical and/or optical devices on or in the removable media member. In addition, it may be desirable to provide one or more electrical and/or optical links or connections between the electrical and/or optical devices on or in the removable media and the receiving device so that, for example, various functions may be performed by the removable media member. Summary
[Para 6] Many advantages may be had by providing methods and apparatus for receiving a removable media member, and more specifically, for providing tighter alignment tolerances between an inserted removable media member and a receiving device. There may also be methods and apparatus for providing one or more electrical or optical device on or in the removable media member itself, and for providing an electrical and/or optical link between the one or more electrical and/or optical devices on or in the removable media and the receiving device.
[Para 7] In a first illustrative example, an apparatus is provided for accepting a removable media member. The apparatus includes a first member and a second member, wherein the first member and the second member are adapted to move away from each other to provide a space for receiving a removable media member. Once the removable media member is inserted into the space, the first member and second member can be moved toward each other to engage and/or secure the removable media member.
[Para 8] In one illustrative example, the first member has one or more L-shaped cleats that provide a slot to receive the removable media member. The L-shaped cleats may include, for example, a first leg that extends away from the first member and toward the second member, and a second leg that extends from a distal end of the first leg and in a perpendicular direction relative to the first leg so that a channel or receiving slot is formed. The channel or receiving slot may then receive at least one side of the removable media member. [Para 9] In some examples, two L-shaped cleats are provided for providing two spaced channels for receiving opposing sides of the removable media member. That is, the channel or slot of the first L- shaped cleat and the channel or slot of the second L-shaped cleat may be arranged so that the removable media member slides into both channels when it is inserted between the first member and the second member. In one example, the two L-shaped cleats are secured to the first member.
[Para 10] During use, the first member and the second member may be moved away from one another, and the removable media member may be slid into the channel or receiving slots provided by the one or more L-shaped cleats. The L-shaped cleats may be positioned so that that when the removable media member is received by the one or more L- shaped cleats, the removable media member is at least roughly aligned with a desired position relative to the first member and/or second member. The first member and the second member may then be moved toward one another to engage and/or secure the removable media member therebetween.
[Para 1 1] To remove the removable media member, the first member and the second member may be moved away from each other. Because at least part of the removable media member is positioned in the channel or slot of the one or more L-shaped cleats, and when the one or more L-shaped cleats are secured to the first member, the removable media member may be pulled away from the second member by the L-shaped cleats as the first member and second member are moved away from each other.
[Para 12] To provide better alignment between the removable media member and the first and/or second members, the second member may include one or more alignment pins that extend toward the first member. The removable media member may then include one or more receiving holes for receiving the one or more alignment pins. The alignment pins and receiving holes may provide improved alignment between the removable media member and the first and/or
second members when the removable media member is secured between the first member and the second member. [Para 13] The one or more L-shaped cleats may be used to pull the removable media member away from the second member, thereby separating the one or more receiving holes of the removable media member from the one or more alignment pins that are extending from the second member. With the one or more receiving holes separated from the alignment pins, the removable media member then may be more easily removed from between the first member and the second member.
[Para 14] In some examples, the removable media member may include one or more electrical and/or optical devices. For example, the removable media member may include one or more transistors, diodes, sensors, vertical cavity surface emitting lasers (VCSELs), LEDs, electro-statically actuated actuators or pumps, or any other suitable electrical and/or optical device. To provide power and/or to communicate or control the one or more electrical and/or optical devices, an electrical and/or optical interface may be provided between the first and/or second member and the removable media member.
[Para 15] In one illustrative example, one or more electrical contact pads are provided on a surface of the removable media member. The one or more electrical contact pads may be electrically connected to the one or more electrical and/or optoelectronic devices of the removable media member, such as by a metal trace or the like. In one
illustrative example, the first member may include one or more spring biased probes that extend outward away from the first member and toward the second member. The one or more spring biased probes may be positioned to align with the one or more electrical contact pads of the removable media member when the removable media member is at a desired positioned between the first member and the second member. In some cases, the one or more alignment pins discussed above may help provide alignment between the one or more spring biased probes of the first member and the one or more electrical contact pads of the removable media member. When the first member and the second member are moved toward one another to secure and/or engage the removable media member, the one or more spring biased probes of the first member may make electrical contact with the one or more electrical contact pads of the removable media member.
[Para 16] To help separate the one or more spring biased probes of the first member from the one or more electrical contact pads when the first member is moved away from the second member, an outward or separating bias may be provided between the first member and the removable media member. This outward bias may be overcome when the first member and the second member are moved toward each other to secure and/or engage the removable media member. However, when the first member and the second member are moved away from each other to release the removable media member, the outward bias may separate the one or more spring biased probes of
the first member from the one or more electrical contact pads, which may make the removal of the removable media member from between the first member and the second member easier and may help protect the spring bias probes from damage.
[Para 17] In another illustrative example, one or more optical transmitters and/or receivers may be provided on a surface of the removable media member. The one or optical transmitters and/or receivers may be electrically connected to the one or more electrical and/or optoelectronic devices of the removable media member, such as by an optical waveguide, metal trace, or the like. In this example, the first member and/or second member may include one or more optical transmitters and or optical receivers, which may be positioned to align with the one or more optical transmitters and/or receivers of the removable media member when the removable media member is at a desired positioned between the first member and the second member. In some cases, the one or more alignment pins discussed above may help provide alignment between the optical transmitters and/or optical receivers of the first and/or second members and the one or more optical transmitters and/or optical receivers of the removable media member. When the first member and the second member are moved toward one another to secure and/or engage the removable media member, the one or more optical transmitters and/or optical receivers of the first and/or second members become aligned with the one or more optical transmitters and/or optical receivers of
the removable media member to provide a communications link therebetween.
[Para 18] In some cases, the removable media member may include one or more fluid ports for accepting or delivering fluid to and/or from the removable media member. In one illustrative example, the removable media member may be a fluidic cartridge adapted for use in flow cytometry. The fluidic cartridge may include one or more flow channels. The one or more fluid ports may be in fluid communication with at least some of the flow channels. When so provided, one or more corresponding fluid ports may be provided on the first member and/or second member, as desired. The one or more fluid ports of the first member and/or second member are positioned to align with at least selected ones of the fluid ports of the removable media member when the removable media member is secured and/or engaged by the first member and the second member.
[Para 19] In some cases, one or more alignment pins as discussed above may be provided to help provide alignment between the one or more fluid ports of the first member and/or second member and the one or more fluid ports of the removable media member. In addition, an outward bias may be provided between the removable media member and the first member and/or second member to help separate the one or more fluid ports of the first member and/or second member and the one or more fluid ports of the removable media member when the first member is moved away from the second member.
[Para 20] In some cases, the manufacture of the removable media member may create a ridge, a burr, or other imperfections, particularly around the outer perimeter of the removable media member. In one example, a fluidic cartridge may be manufactured by laminating several layers or sheets together, and then cutting individual fluidic cartridges from the laminated structure. At the cut lines, ridges, burrs, and other imperfections may arise. To help the removable media member seat correctly along the first and/or second member, a groove or other relief structure may provided in receiving surface of the first and/or second member to accommodate the one or more imperfections in the removable media member. In one illustrative example, a groove may extend along a groove path that corresponds to, for example, the perimeter of the removable media member in anticipation of imperfections that might occur along the perimeter of the removable media member. It is contemplated, however, that a groove or other relief structure may be provided at any location where an anticipated imperfection might occur in the removable media member.
Brief Description of the Drawing
[Para 21] Figure 1 is a perspective view of an illustrative portable cytometer;
[Para 22] Figure 2 is a schematic view of the illustrative portable cytometer of' Figure 1 ;
[Para 23] Figure 3 is a more detailed schematic diagram showing the portable cytometer of Figure 2 with the cover not yet depressed;
[Para 24] Figure 4 is a more detailed schematic diagram showing the portable cytometer of Figure 2 with the cover depressed;
[Para 25] Figure 5 is a perspective view of another illustrative portable cytometer;
[Para 26] Figure 6 is a perspective side view of the illustrative portable cytometer of Figure 5;
[Para 27] Figure 7 is another perspective view of the illustrative portable cytometer of Figure 5;
[Para 28] Figure 8 is a perspective view of the first plate or member of the illustrative portable cytometer of Figure 5;
[Para 29] Figure 9 is a perspective view of the lower cleat of the first plate or member of Figure 8;
[Para 30] Figure 10 is a perspective view of the upper cleat of the first plate or member of Figure 8;
[Para 31 ] Figure 1 1 is a perspective view of the outward bias wedge of the first plate or member of Figure 8;
[Para 32] Figure 1 2 is a perspective view of the second plate or member of the illustrative portable cytometer of Figure 5;
[Para 33] Figure 13 is a perspective of a modified second plate of member of the illustrative cytometer;
[Para 34] Figure 14a is a plan view of an insertable cartridge;
[Para 35] Figure 14b is an edge view of the cartridge;
[Para 36] Figure 14c is a graph of a cartridge flow test;
[Para 37] Figure 14d is a graph of a cartridge test of flow rise and decay signals;
[Para 38] Figure 1 5a is a plan view of the cartridge having several dimensions;
[Para 39] Figure 1 5b is a perspective view of the cartridge;
[Para 40] Figure 16 shows a cross-section view of the top side of the cartridge showing a detector cone and a source cone relative to the flow channel window;
[Para 41] Figure 17 is the same view as Figure 16 except with a cone obstruction removed;
[Para 42] Figure 18 is the same view as Figure 16 except the positions of the detector and the source are reversed along with their corresponding cones;
[Para 43] Figure 19 is the same view as Figure 16 except it has a multiple detector cone arrangement; and
[Para 44] Figures 20 and 21 show the cartridge rotated about 90 degrees relative to the positions of the detector and source in comparison to Figure 16.
Description
[Para 45] For illustrative purposes, a portable flow cytometer system is described. Present approaches may have wide applicability to numerous other removable media systems including, for example, removable or replaceable filters, removable ink and toner cartridges, removable data storage devices such as magnetic or optical disks, removable magnetic tape cartridges, removable memory sticks, as well as many other systems and/or devices that use removable media.
[Para 46] Figure 1 is a perspective view of an illustrative portable cytometer. The portable cytometer is generally shown at 10, and includes a housing 12 and a removable or replaceable cartridge 14. The removable cartridge 14 may have a front side, a back side, and one or more lateral sides extending between the front side and the back side. The illustrative housing 12 includes a base 16, a cover 1 8, and a hinge 20 that attaches the base 16 to the cover 18. The base 16 includes an array of light sources 22, associated optics and the necessary electronics for operation of the cytometer. The cover 1 2 includes a manual pressurizing element, pressure-chambers with control microvalves, and an array of light detectors 24 with associated optics, as further described in U.S. Patent No. 6,597,438, issued July 22, 2003, to Cabuz et al., and entitled "Portable Flow Cytometer", and U.S. Patent Application 6,549,275, issued April 1 5, 2003, to Cabuz et al., and entitled Optical Detection System for Flow Cytometry", both of which are incorporated herein by reference. [Para 47] The removable member (e.g., cartridge) 14 may receive a sample fluid via a sample collector port 32. A cap 38 may be used to protect the sample collector port 32 when the removable cartridge 14 is not in use. The removable cartridge 14 may perform blood dilution, red cell lysing, and hydrodynamic focusing for core formation. The removable cartridge 14 may be constructed similar to the fluidic circuits available from Micronics Technologies, some of which are fabricated using a laminated structure with etched fluid channels.
[Para 48] The removable cartridge 14 is inserted into the housing when the cover 18 is in the open position. The removable cartridge 14 may include holes 26a and 26b for receiving registration pins 28a and 28b in the base 16, which help provide alignment and coupling between the different parts of the instrument. The removable cartridge 14 may also include a transparent flow stream window 30, which is in alignment with the array of the light sources 22 and light detectors 24. When the cover is moved to the closed position, and the system is pressurized, the cover 18 provides controlled pressures to pressure receiving ports 34a, 34b, and 34c in the removable cartridge 14 via pressure providing ports 36a, 36b and 36c, respectively. [Para 49] To initiate a test, the cover 18 is lifted and a new cartridge 14 is placed and registered onto the base 16. A blood sample is introduced into the sample collector 32. The cover 1 8 is closed and the system is manually pressurized. Once pressurized, the instrument performs a white blood cell cytometry measurement. The removable cartridge 14 provides blood dilution, red cell lysing, and hydrodynamic focusing for core formation. The light sources 22, light detectors 24 and associated control and processing electronics perform differentiation and counting of white blood cells based on light scattering signals received by the light detectors 24. Rather than using a hinged construction for the housing 12, it is contemplated that a sliding cartridge slot or any other suitable construction may be used, including that described further below with respect to Figures 5-12.
[Para 50] Figure 2 is a schematic view of the illustrative portable cytometer of Figure 1 . As above, the base 16 may include an array of light sources 22, associated optics and the necessary control and processing electronics 40 for operation of the cytometer. The base 16 may also include a battery 42 for powering the cytometer. The cover 1 2 is shown having a manual pressurizing element 44, pressure- chambers 46a, 46b and 46c with control microvalves, and an array of light detectors 24 with associated optics. The removable cartridge 14 may receive a sample fluid via the sample collector port 32. When pressurized by the cover 18, the removable cartridge 14 performs blood dilution, red cell lysing, and hydrodynamic focusing for core formation in an example. Once formed, the core is provided down a flow stream path 50, which passes the flow stream window 30 of Figure 1. The array of light sources 22 and associated optics in the base provide light through the core stream via the flow stream window 30. The array of light detectors and associated optics receive scattered and non-scattered light from the core, also via the flow stream window 30. The controller or processor 40 receives output signals from the array of detectors, and differentiates and counts selected white blood cells that are present in the core stream. [Para 51] It is contemplated that the removable cartridge 14 may include a fluid control block 48 for helping to control the velocity of each of the fluids. In the illustrative example, the fluid control block 48 includes flow sensors for sensing the velocity of the various fluids and report the velocities to the controller or processor 40. The
controller or processor 40 may then adjust the microvalves associated with pressure-chambers 46a, 46b and 46c to achieve the desired pressures and thus desired fluid velocities for proper operation of the cytometer. In some examples, and as further described below, one or more electrical connections may be provided between the processor 40 in the base 16 and the flow sensors on the removable cartridge 14. [Para 52] Because blood and other biological waste can spread disease, the removable cartridge 14 may have a waste reservoir 52 downstream of the flow stream window 30. The waste reservoir 52 receives and stores the fluid of the flow stream in the removable cartridge 14. When a test is completed, the removable cartridge may be removed and disposed of, in a container compatible with biological waste. [Para 53] Figure 3 is a more detailed schematic diagram showing the portable cytometer of Figure 2 with the cover 1 8 not yet depressed. Figure 4 is a more detailed schematic diagram showing the portable cytometer of Figure 2 with the cover depressed. The cover 1 8 is shown having a manual pressurizing element 44, pressure-chambers 46a, 46b and 46c, and control microvalves generally shown at 60. The array of light sources and detectors are not shown in these Figures. [Para 54] There are three pressure chambers 46a, 46b and 46c, one for each fluid to be pressurized. In the illustrative example, pressure chamber 46a provides pressure to a blood sample reservoir 62, pressure chamber 46b provides pressure to a lyse reservoir 64, and pressure chamber 46c provides pressure to a sheath reservoir 66. The size and shape of each pressure chamber 46a, 46b and 46c may be
tailored to provide the desired pressure characteristics to the corresponding fluid.
[Para 55] Pressure chamber 46a includes a first pressure chamber 70 and a second' pressure chamber 72. A first valve 74 is provided between the first pressure chamber 70 and the second pressure chamber 72 for controllably releasing the pressure in the first pressure chamber 70 to a second pressure chamber 72. A second valve 76, in fluid communication with the second pressure chamber 72, controllably vents the pressure in the second pressure chamber 72. Each valve may be an array of electrostatically actuated microvalves that are individually addressable and controllable, as described in, for example, co-pending U.S. Patent Application Serial Number 09/404,560, entitled "ADDRESSABLE VALVE ARRAYS FOR PROPORTIONAL PRESSURE OR FLOW CONTROL", and incorporated herein by reference. Pressure chambers 46b and 46c include similar valves to control the pressures applied to the lyse reservoir 64 and sheath reservoir 66, respectively. Alternatively, each valve may be an array of electrostatically actuated microvalves that are pulse modulated with a controllable duty cycle to achieve a controlled "effective" flow or leak rate. Alternatively, each valve may be a similar to that described in co-pending U.S. Patent Application Serial Number 1 100.1 1741 01 . entitled "ELECTROSTATICALLY ACTUATED VALVE", which is incorporated herein by reference.
[Para 56] The removable cartridge 14 has pressure receiving ports 34a, 34b, and 34c for receiving the controlled pressures from the cover 18.
The controlled pressures are provided to the blood reservoir 62, lyse reservoir 64 and sheath reservoir 66, as shown. The lyse reservoir 64 and sheath reservoir 66 may be filled before the removable cartridge 14 is shipped for use, while the blood reservoir 62 is filled from sample collector port 32. A blood sample may be provided to the sample collector port 32, and through capillary action, the blood sample may be drawn into the blood reservoir 62. Once the blood sample is in the blood reservoir 62, the cover 18 may be closed and the system may be pressurized.
[Para 57] A flow sensor is provided in-line with each fluid prior to hydrodynamic focusing. Each flow sensor 80, 100 and 102 measures the velocity of the corresponding fluid. The flow sensors may be thermal anemometer type flow sensors, and/or of the microbridge or microbrick type flow sensor. Microbridge flow sensors are described in, for example, U.S. Patent No. 4,478,076, U.S. Patent No. 4,478,077, U.S. Patent No. 4,501 ,144, U.S. Patent No. 4,651 ,564, U.S. Patent No.4,683,1 59, and U.S. Patent No. 5,050429, all of which are incorporated herein by reference. An output signal from each flow sensor 80, 100 and 102 is provided to controller or processor 40 via one or more electrical connection between the removable cartridge and the base.
[Para 58]The controller or processor 40 opens the first valve 74 when the velocity of the blood sample drops below a first predetermined value and opens the second valve 76 when the velocity of the blood sample increases above a second predetermined value. Valves 84, 86,
94 and 96 operate in a similar manner to control the velocities of the lyse and sheath fluids.
[Para 59] During operation, and to pressurize the system, the manual pressurizing element 44 is depressed. In the example shown, the manual pressurizing element 44 includes three plungers, with each plunger received within a corresponding one of the first pressure chambers. The plungers create a relatively high non-precision pressure in the first pressure chambers. Lower, controlled pressures are built in the secondary chambers by opening the first valves 70, 84 and 94, which produce a controllable leak into the secondary chambers. If two much pressure builds up in the secondary pressure chambers, the corresponding vent valve 76, 86 and 96 are opened to relieve the pressure.
[Para 60] When closing the cover 1 8, the normally open first valves 74, 84 and 94 are closed while the vent valves 76, 86 and 96 are open. When a predetermined pressure P is achieved in the first pressure chambers, the vent valves 76, 86 and 96 are closed, and the first valves 74, 84 and 94 are opened to build a lower pressure P' in the secondary pressure chambers. The controlled pressure in the secondary pressure chambers provide the necessary pressures to the fluidic circuit of the removable cartridge 14 to produce fluid flow for the blood, lyse and sheath. The velocity of the fluid flow is then measured by the downstream flow sensors 80, 100 and 102. Each flow sensor provides an output signal that is used by the controller or processor 40 to control the operation of the corresponding first valve
and vent valve to provide a desired and constant flow rate for each fluid.
[Para 61 ] Downstream valves generally shown at 1 10 may also be provided. Controller or processor 40 may close downstream valves 1 10 until the system is pressurized. This may help prevent the blood, lyse and sheath from flowing into the fluid circuit before the circuit is pressurized. In another example, downstream valves 1 10 are opened by mechanical action when the cover is closed. [Para 62] Figure 5 is a perspective view of another illustrative portable cytometer. The basic operation of the portable cytometer of Figure 5 is similar to that described above with respect to Figures 1 -4 above. The portable cytometer of Figure 5 is generally shown at 1 20, and includes a base 1 22, a first member 1 24, a second member 126, a clamp frame 1 28 with clamp lever 1 30, an air buffer module 1 32, a valve module assembly 134 with polymer microvalves, an air accumulator module 1 36, and an optics assembly 140. [Para 63] In the illustrative example, the second member 1 26 is fixed to the base 122. A number of shoulder screws 142a, 142b, 142c and 142d (142d not shown in Figure 5) pass through holes in the first member 1 24 and are secured to the second member 1 26. Springs 144a, 144b, 144c and 144d (144d not shown in Figure 5) are placed between the first member 1 24 and the head of the corresponding shoulder screw 142a, 142b, 142c and 142d. The springs 144a, 144b, 144c and 144d provide a bias force to the first member 124 toward the second member 1 26.
[Para 64] The clamp frame 1 28 is secured to the second member 126 as shown. The clamp lever 130 interacts with the clamp frame to provide an outward bias force to the first member away from the second member 1 26. By moving the clamp lever 1 30 in a first direction, the first member 124 is moved away from the second member 1 26 by overcoming the inward bias force provided of spring! 44a, 144b, 144c and 144d. By moving the clamp lever 1 30 in a second opposite direction, the first member 1 24 is moved toward the second member 1 26, assisted by the inward bias force provided of springl 44a, 144b, 144c and 144d.
[Para 65] During operation, the clamp lever 1 30 may be moved in the first direction to move the first member 124 away from the second member 1 26, leaving a space therebetween. A removable media member, such as a removable fluidic cartridge 1 50, may then be slid into the space. The removable cartridge 150 may have a front side, a back side, and one or more lateral sides extending between the front side and the back side, as shown. The clamp lever 1 30 may then be moved in the second direction to move the first member 1 24 toward the second member 1 36 to secure and/or engage the removable media member 1 50, as shown in Figure 5. Figure 6 is a perspective side view of the illustrative portable cytometer of Figure 5. [Para 66] In one illustrative example, the removable media member 1 50 has one or more fluid ports in the front and/or back sides, similar to that described above with respect to Figures 1 -4. It is contemplated that the one or more fluid ports may be adapted to
accept either a gas or a liquid, depending on the application. The second member 126 of the illustrative example includes corresponding fluid ports that align with the one or more fluid ports of the removable media member 1 50. One such fluid port is shown at 160 in Figure 6. A fluid port gasket (see Figure 12 below) may be secured to the second member 126 to help provide a better seal, if desired.
[Para 67] A fluid control module may then be fluidly coupled to the fluid ports of the second member 1 26. In the illustrative example, the fluid control module includes the air accumulator module 1 36, the valve module assembly 1 34 with polymer microvalves, and the air buffer module 1 32. The air accumulator module 1 36 includes an internal chamber for accumulating air pressure. A port (not shown) may be provided from the internal chamber of the air accumulator 1 36 to an air pressure source. The accumulated air pressure may be supplied to the valve module assembly 1 34. The valve module assembly may include one or more microvalves, such as polymer microvalves as disclosed in U.S. Patent Application Serial Number 1 100.1 1 74101 . entitled "ELECTROSTATICALLY ACTUATED VALVE", which is incorporated herein by reference. In the illustrative example, the valve module assembly 1 34 may provide three separate pressure channels including a blood channel, a lyse channel and a sheath channel, as shown and described above with respect to Figures 1 -4. The valve module assembly 1 34 may be controlled by a controller in base 122 to provide three separate controlled pressures to air buffer
module 1 32. Air buffer module 1 32 buffers the controlled pressures, and delivers the pressurized air to the fluid ports of the removable media member 1 50 via the fluid ports that pass in or through the second member 1 26.
[Para 68] In some cases, the removable media member 1 50 may include one or more electrical and/or optical devices. For example, and in the illustrative example, the removable media member 1 50 may include three flow sensors, with each flow sensor measuring the flow rate of the pressurized fluid through one of the three separate pressure channels of the removable media member 1 50. Like above, the flow sensors may be thermal anemometer type flow sensors, and/or of the microbridge or microbrick type flow sensor, commercially available from Honeywell International. Microbridge flow sensors are described in, for example, U.S. Patent No. 4,478,076, U.S. Patent No. 4,478,077, U.S. Patent No. 4,501 ,144, U.S. Patent No. 4,651 ,564, U.S. Patent No.4,683,1 59, and U.S. Patent No. 5,050429, all of which are incorporated herein by reference. An output signal from each flow sensor is provided to controller or processor in base 122, via an electrical and/or optical coupling between the removable media member and the second member 1 26.
[Para 69] The optical assembly module 140 may include one or more light sources (e.g. VCSELs) on one side of the removable cartridge 150, one or more light detectors on the opposite side of the removable cartridge 1 50, and associated optics. When so provided, the removable cartridge 1 50 may include a transparent flow stream
window, which is in alignment with the one or more light sources and one or more light detectors. The air buffer module 1 32, valve module assembly 1 34, and air accumulator module 1 36 may be controlled to form a core stream down a flow stream path that passes the flow stream window in the removable cartridge 1 50. The light sources, when activated, provide light through the core stream via one side of the flow stream window. The optical detectors receive scattered and non-scattered light from the core stream via the opposite side of the flow stream window. A controller or processor in the base 1 22 then receives output signals from the detectors, and differentiates and counts selected white blood cells that are present in the core stream. [Para 70] Figure 7 is another perspective view of the illustrative portable cytometer of Figure 5, further illustrating additional detail. Figure 7 shows a hole 1 70 through the first member 1 24 and second member 126. The hole 170 may allow the one or more light sources and one or more light detectors of the optical assembly module 140 to directly access the flow stream window of the removable cartridge (not shown in Figure 7).
[Para 71] Figure 7 also shows one or more spring biased probes secured to the first member 1 24. The one or more spring biased probes may be positioned to align with the one or more electrical contact pads on the removable cartridge when the removable cartridge is at a desired positioned between the first member 1 24 and the second member 1 26. In the illustrative example, three arrays of spring biased probes 174a, 174b and 174c are provided, with each
array mounted via a small PC board and secured within a corresponding hole in the first member 124. The holes in the first member 124 may provide access to the reverse side of the spring bias probes, which in some examples, may provide a convenient location to make an electrical connection between a controller in the base 122 and each spring bias probe.
[Para 72] In addition, or alternatively, it is contemplated that one or more optical transmitters and/or optical detectors may be secured to the first and/or second member. The one or more optical transmitters and/or optical detectors may be positioned to align with the one or more optical detectors and/or optical transmitters on the removable cartridge when the removable cartridge is at a desired positioned between the first member 1 24 and the second member 126. This may provide an optical link between the removable cartridge and the first member and/or second member 126, as desired. [Para 73] Figure 8 is a perspective view of the first member 1 24 of the illustrative portable cytometer of Figure 5. Figure 8 shows the opposite side of the three arrays of spring biased probes 1 74a, 1 74b and 1 74c of Figure 7. As can be seen, each spring bias probes is biased by a spring in an outward direction away from the first member 1 24 and toward the removable cartridge (not shown in Figure 8). The spring biased probes may be positioned to align with the one or more electrical contact pads on the removable cartridge when the removable cartridge is at a desired positioned between the first member 1 24 and the second member 126. When the first member 124 and the second
member 126 are moved toward one another to secure and/or engage the removable cartridge, the spring biased probes may make electrical contact with the one or more electrical contact pads on the removable cartridge.
[Para 74] To help separate the spring biased probes from the one or more electrical contact pads on the removable cartridge when the first member 124 is moved away from the second member 1 26, an outward or separating bias 1 78 may be provided between the first member 124 and the removable cartridge. Referring momentarily to Figure 1 1 , the outward bias 1 78 may include a wedge 1 80 and a spring 182. The spring 182 may be positioned in a recess 184 in the first member 1 24, with the wedge 1 80 biased in an outward direction by the spring 1 82. [Para 75] Referring back to Figure 8, the outward bias 178 may be overcome when the first member 1 24 and the second member 1 26 are moved toward each other to secure and/or engage the removable cartridge. However, when the first member 1 24 and the second member 1 26 are moved away from each other to release the removable cartridge, the outward bias 1 78 may separate the one or more spring biased probes 1 74a, 1 74b and 1 74c from the one or more electrical contact pads of the removable cartridge, which may make the removal of the removable cartridge from between the first member 1 24 and the second member 126 easier and may help protect the spring bias probes from damage during the removal process. [Para 76] The first member 124 may also have one or more L-shaped cleats that provide a slot to receive the removable cartridge. In the
illustrative example of Figure 8, an upper L-shaped cleat 190 and a lower L-shaped cleat 1 92 are provided. The L-shaped cleats 190 and 1 92 may each include, for example, a first leg 1 94 that extends away from the first member 1 24 and toward the second member, and a second leg 196 that extends from a distal end of the first leg 1 94 and in a perpendicular direction relative to the first leg 194 so that a channel or receiving slot 198 is formed. The channel or receiving slot 198 may then receive one side of the removable media member. In the illustrative example, the upper L-shaped cleat 190 includes a second leg 196 that extends in a downward direction, and the lower L- shaped cleat 192 includes a second leg that extends in an upward direction. In addition, the upper L-shaped cleat 1 90 and the lower L- shaped cleat 192 are spaced so that two spaced channels 196 are provided for receiving opposing sides (e.g. upper side and lower side) of the removable cartridge. That is, the channel or slot of the upper L- shaped cleat 190 and the channel or slot of the lower L-shaped cleat 192 are arranged so that the removable cartridge slides into both channels when it is inserted between the first member 1 24 and the second member 126. In the illustrative example, the two L-shaped cleats are secured to the first member 124.
[Para 77] An alignment pin 200 may be provided toward the back of the first member 1 24 to engage the back of the removable cartridge. The alignment pin 200 may be positioned to stop the removable cartridge at or near the desired insertion position between the first member 124 and the second member 126.
[Para 78] During use, the first member 124 and the second member 126 may be moved away from one another, and the removable cartridge may be slid into the channel or receiving slots 1 98 provided by the L-shaped cleats 190 and 192 until the removable cartridge engages the alignment pin 200. The L-shaped cleats 1 90 and 192 may be positioned so that that when the removable cartridge is received by the L-shaped cleats 190 and 192, the removable cartridge is at least roughly aligned with a desired position relative to the first member 124 and/or second member 126. The first member 124 and the second member 1 26 may then be moved toward one another to engage and/or secure the removable cartridge therebetween. [Para 79] To remove the removable cartridge, the first member 1 24 and the second member 126 may be moved away from each other. Because the upper and lower edges of the removable cartridge are positioned in the channel or slot 198 of the L-shaped cleats 190 and 1 92, the removable cartridge is pulled away from the second member 126 by the second legs 196 of the L-shaped cleats 190 and 192 as the first member 124 and second member 1 26 are moved away from each other.
[Para 8O]To provide better alignment between the removable media member and the first member 124 and/or the second members 126, the second member 1 26 may include one or more alignment pins 200a-200c that extend toward the first member (see Figure 12). The removable media member 1 50 may then include one or more receiving holes for receiving the one or more alignment pins 200a-200c. The
alignment pins 200a-200c and receiving holes may provide improved alignment between the removable media member 1 50 and the first member 124 and/or second member 126 when the removable media member 1 50 is secured between the first member 124 and the second member 1 26.
[Para 81 ] The L-shaped cleats 190 and 192 may be used to pull the removable media member 1 50 away from the second member 1 26, thereby separating the one or more receiving holes of the removable media member 1 50 from the one or more alignment pins 200a-200c that are extending from the second member 126. With the one or more receiving holes separated from the alignment pins 200a-200c, the removable media member 1 50 then may be more easily removed from between the first member 124 and the second member 126. [Para 82] Figure 9 is a perspective view of the lower cleat 192 of Figure 8. The illustrative lower cleat 192 includes a first leg 194a and a second leg 196a, wherein the second leg 196a extends from a distal end of the first leg 194a and in a perpendicular direction to form a channel or receiving slot 198a. A mounting leg 202a may extend from the first leg 194 as shown, for mounting the lower cleat 1 92 to the first member 124.
[Para 83] Figure 10 is a perspective view of the upper cleat 1 90 of Figure 8. The illustrative upper cleat 1 90 includes a first leg 194b and a second leg 196b, wherein the second leg 196b extends from a distal end of the first leg 194b and in a perpendicular direction to form a channel or receiving slot 198b. A mounting leg 202b may extend
from the first leg 1 94b as shown, for mounting the upper cleat 190 to the first member 1 24.
[Para 84] Figure 1 2 is a perspective view of the second plate or member 1 26 of the illustrative portable cytometer of Figure 5. The second member 126 may be fixed to the base 122 by screws that are threaded into screw holes 210a and 210b. As detailed above, the second member 126 may further include a hole 1 70 that may allow the one or more light sources and one or more light detectors of the optical assembly module 140 to directly access the flow stream window of the removable cartridge.
[Para 85] In the illustrative example, the second member 126 includes a flat major surface with a recessed portion for receiving the removable cartridge. To provide better alignment between the removable cartridge and the first member 1 24 and/or the second members 126, the second member 1 26 may include one or more alignment pins 200a-200c that extend toward the first member. The removable cartridge 1 50 may then include one or more receiving holes for receiving the one or more alignment pins 200a-200c. The alignment pins 200a-200c and receiving holes may provide improved alignment between the removable cartridge and the first member 124 and/or second member 126 when the removable cartridge is secured between the first member 124 and the second member 1 26. [Para 86] Additional recesses 212 and 214 may be included to receive the second legs 196a and 196b of the upper L-shaped cleat 190 and lower L-shaped cleat 192, respectively (see Figures 8-10). By
providing relief for the second legs 196a and 196b of the upper L- shaped cleat 190 and lower L-shaped cleat 192, the removable cartridge may directly engage the surface of the second member 126. [Para 87] In some cases, the manufacture of the removable cartridge may create a ridge, a burr, or other imperfections, particularly around the outer perimeter of the removable cartridge. In one example, a fluidic cartridge may be manufactured by laminating several layers or sheets together, and then cutting individual fluidic cartridges from the laminated structure. At the cut lines, ridges, burrs, and/or other imperfections may arise. To help the removable cartridge seat flush with the surface of second member 126, a groove 216 or other relief structure may be provided in the receiving surface of the second member 126 to accommodate the one or more imperfections in the removable cartridge. In the illustrative example of Figure 1 2, a groove 216 may extend along a groove path that extends around the perimeter of the removable cartridge. It is contemplated, however, that a groove or other relief structure may be provided at any location where an anticipated imperfection might occur in the removable cartridge. It is also contemplated that a groove or other relief structure may be provided in the receiving surface of the first member 1 24, if desired.
[Para 88] In one illustrative example, the removable cartridge has one or more fluid ports, similar to that described above with respect to Figures 1 -4. It is contemplated that the one or more fluid ports may be adapted to accept either a gas or a liquid, depending on the
application. The second member 1 26 of the illustrative example includes corresponding fluid ports 220a-220c that align with the one or more fluid ports of the removable cartridge. A fluid port gasket 222 may be secured to the second member 1 26 to help provide a better seal, if desired.
[Para 89] Figure 1 3 is a perspective view of the second member 126 with the single gasket 222 of Figure 1 2. This single gasket may have been fraught with difficulties such as leaks. A cure against leaks at the interface having the single piece gasket 222 may have included a thicker tape under the gasket and more clamp pressure from the first element 124 on the cartridge 1 50 to push the cartridge with greater force against the second element 1 26. Gasket 222 may be removed and replaced with three separate gaskets 223, 224 and 225, for the ports 220a, 220b and 220c for the movement of the sheath fluid, the lyse and the sample, respectively, from second member 1 26 to the cartridge 1 50 at its input ports 231 , 232 and 233. The gaskets may be O-ring shaped and made from a silicone or like material. The replacement of gasket 222 with the individual gaskets 223, 224 and 225 may provide much greater assurance for prevention of leaks at those fluidic connections between the cartridge 1 50 and the second member 126. In view of Figure 6, insufficient clamp pressure of first member 124 against the cartridge 1 50 towards the second member 1 26 may affect the integrity of the seals at the interface of the two sets of ports, particularly without the individual gaskets. Leaks at this
interface not only may result in fluid coming out of the system but allow air to enter the fluidic network or circuit. [Para 90] For easier insertion of cartridge 1 50 and accurate alignment of the cartridge with the second member 1 26, alignment pins 234, 235 and 236 may be shorter (Figure 1 3) than the original pins and replace the one or more original alignment pins 200a, 200b and 200c (Figure 12). The key alignment may be provided by pin 234 of the second member 126 relative to hole 237 of card 1 50. The other pins 235,and 236 may be present to prevent swinging of the cartridge about the pivot guide pine 234. More or less alignment pins may instead be present in the second member 126. Alignment pins 234, 235 and 236 may fit into alignment holes 237, 238 and 239, respectively.
[Para 91 ] Flow sensors 226, 227 and 228 may be situated in cartridge 1 50 and may be connected via three arrays of spring biased probes 1 74a, 1 74b and 1 74c, respectively, on the first member 124 to electronics situated off the cartridge. The flow sensors 226, 227 and 228 may be utilized for the monitoring the flow of the sheath fluid, the lyse and the sample, respectively. The flow sensors may be placed in the cartridge in an area 240 of Figure 14a. The flow sensors 226, 227 and 228 may be countersunk into the cartridge with their electrical contacts facing away from the cartridge so that when cartridge 1 50 is inserted in the direction 199 in the slot between members 1 24 and 126, from left to right in Figure 7, such that the contacts of the flow sensors line up with the arrays of the spring based probes 1 74a- 1 74c,
in the upper right portion 240 (Figure 14a), so as to make an appropriate electrical contact with them. Between the flow sensors and a surface of the cartridge to make connection with fluid ports communication with the sheath fluid, lyse and the sample, there may be a tape and/or adhesive on the surface with holes to the ports to seal the flow sensor and prevent leakage of the sheath, lyse and/or sample from the fluidic connections between the flow sensors and the cartridge. To better insure against leakage, the tape and /or adhesive may be replaced or overlaid with a gasket of similar shape having three holes lining up with the ports. The gasket may be a custom molded gasket for the interface between the flow sensors and the cartridge. Or the interface may incorporate separate O-ring-like gaskets or seals. An adhesive on the flow channel at the top of the respective sensor may be used along with the custom gasket to ease the interchangeability and reusability of the flow sensors from one cartridge to another. The flow sensors may be insertable and removable relative to the cartridge. Once a cartridge is used and becomes disposable, the flow sensors may be removed, cleaned and inserted into a new cartridge to be used for testing and analysis of a sample. Inexpensive flow sensors may be placed in the cartridge in a more permanent manner and be disposed along with the cartridge after completion of the usage. The flow sensor gasket placed in the cartridge may facilitate the moving of the flow sensors from cartridge to cartridge without the risk of leakage.
[Para 92] The cartridge 150 may be fabricated from a plastic or a plastic-like material. Some portions of the walls are thicker for structural rigidity and other portions are thinner so as to provide space in the cartridge for storage of fluids, microfluidic channels and mechanisms. Also, the portion with the fluid flow channel has thin walls to provide a narrow channel for single file flow of the particles in a core stream and to adequately support the light source and detector optics for correct focusing and observation of the core stream in the flow channel. Thin walls may be situated where the various fluid reservoirs and mixing channels are located in the cartridge. [Para 93] An illustrative layer arrangement of cartridge 1 50, from the bottom up as cartridge 1 50 is positioned in Figure 14a with the flow channel 247 to the left at the bottom side, and with an edge view of the cartridge 1 50 in Figure 14b, may include: layer 261 - PET - 5 mils normal; layer 262 - ACA - 6 mils normal; layer 263 - PET - 2 mils normal; layer 264 - ACA - 4 mils normal; layer 265 - PET - 2 mils inverted; layer 266 - ACA - 6 mils normal; layer 267 - PET - 5 mils inverted; layer 268 - ACA - 4 mils normal; layer 269 - PET - 5 mils inverted; layer 270 - ACA - 6 mils normal; layer 271 - acrylic - 125 mils normal; layer 272 - ACA - 6 mils normal; and layer 273 - PET - 5 mils normal. There may be more or less layers sometimes depending on the desired specifications and application of card 150. The Figures are not necessarily to scale.
[Para 94] The thin layers may be of a very precisely controlled thickness. Again, the cytometer flow channel, mixing channels,
sample storage, serpentine channels (such as those for mixing lyse and blood), and other items of critical dimensions may be located in these layers. The walls of the storage should be adequate to ensure compliance of the storage. The thick layer is of less precise thickness. The reagent storage and waste reservoirs are located in this layer. The thick layer provides the mechanical stiffness to the cartridge. The thin precise layers may "interface" with the cartridge clamp frame in such a manner to provide precise alignment of the cartridge relative to the optical subsystem incorporating the light source and detection arrangement. The precision thickness film may be made so as to control the spacing between the sample flow and the light source to ensure appropriate focusing. The thin precise layers may have a very carefully controlled thickness with possibly a less than four percent variation of the thickness. Thickness variation may be more critical in the optical area of the flow channel than other areas of the cartridge. [Para 95] The thin walls may at times present observable phenomena relative to the cartridge, where there is a slow flow rise and decay with starting and stopping of a flow. Effects of those phenomena may be noted in graphed checks of a cartridge. Figure 14c shows a sample flow signal of the cartridge having a removable embedded flow sensor. The graph reveals plot in terms of signal in volts versus measurement units. Curves 301 , 302, 303, 304, 305, 306, 307, 308 and 309 indicated 7 micro liters per minute (um/min), 5 um/min, 3 um/min, 1 .4 um/min, 1 um/min, 0.7 um/min, 0.5 um/min and 0 um/min, respectively. The high signal volts versus a small number of
measurement units reveal a good star-up and the converse reveals a slow start-up which may be due to wall flexing and/or air in the system. Figure 14d reveals sheath flow rise and zero flow decay signals for the cartridge. The measurements are signal in volts versus time in seconds. Plots 31 1 , 31 2 and 31 3 represent zero A, zero F and zero D data, respectively. Plots 314, 31 5 and 316 represent 300 E, 500 C and 700 B data, respectively.
[Para 96] Flexing may affect the focus of the optics relative to the flow channel and problematic data taking. Also, thin walls may affect the pumping and the flow of the fluids in the microfluidic circuits thereby affecting the data taking. One reason is the reservoir walls may flex or have a concave or convex shape relative to the other portions of the cartridge. For instance, the surface of the reagent reservoir may be concave on some of the cartridges. That may prevent the surface touching the manifold surface of the cartridge holder when clamped, and thereby permits the thin wall to flex during operation of the fluidic elements in the cartridge. On the other hand, the thin wall surface is convex, particularly if the reservoir is filled, though it may remain convex when the reservoir is empty. Or the wall of a reservoir may be concave when the reservoir is sort of empty and convex when it is rather full. That means when a flow such as a sheath fluid flow is shut off there may be a slow change of pressure or a remnant of fluid that continues to flow. When the flow is turned on, there may be a delay of the starting of the fluid flow or a build up to operating pressure. These delays of fluidic action may be due to the contraction and
expansion of the reservoir volume, respectively due the flexing of the thin walls. Sheath fluid control may be very critical and significantly affected by flexing thin walls. The change of sheath fluid flow may affect the width and speed of the core stream in the flow channel and lead to inaccurate or unreliable data accession by the cytometer detection system. Flexing of the thin walls may lead to air bubbles entering the system thereby affecting proper operation of the microfluidics of the cartridge, since air in the fluidic network may resulting in notable expansion and contraction with changes in pressure and/or temperature. There should be no flow when the sheath fluid is shut off. The start of the flow and/or pressure should be almost immediate when the flow is turned on. Without good starts and stops of the fluid, data taking may not be as reliable. When the cartridge is clamped, there may be backflow at a vent hole at the filter near the edge of the cartridge above the sample inlet. That may be because a check valve, if there is any, did not work to stop the backflow.
[Para 97] The thin walls may be reinforced with ridges. Ridges or beam-like structures may be also added along one of the dimensions (e.g., the lengthwise dimension) on the thin walls. Or these walls may be made thicker. These walls may consist of thin film material or materials. Additional films may stiffen the thin wall with a minimal thickness increase without compromising the small variation in thickness of the thin wall. Ridges or beam-like structures may also be added to further reinforce the thickened thin walls. Care should be
taken because thickened and/or ridge-reinforced walls may prevent adequate clearance for the fluid and/or result in an air bubble trap. Also, the areas of thin walls on the cartridge may be made smaller or minimized where practical along with achieving the ensured performance expected of the components affected by conditions of the thin walls.
[Para 98] The reagent reservoirs of the cartridge originally had small holes at the top of them, one hole for each, for the independent filling them. However, there occasionally appeared to be an issue with bubbles entering the reagent reservoirs and a subsequent introduction of "compliance" in the fluidic network. For instance, when the reservoir was filled, it may be difficult to be sure that it was filled up to the top of the hole when closing, sealing or plugging the hole without any air being trapped in at the fill hole. For example, sealing a reagent reservoir fill hole may often inject an air bubble into the reservoir. The reservoirs may instead be filled thought the input ports to eliminate the issue. The small holes may be permanently plugged. The input ports would be used anyway for flow purposes. It may be noted that positive pressure in the cartridge after flow testing is stopped may force air bubbles back to the large reservoir. The pressure in the reservoir forced a backflow which returned the air to the reservoir. The disposable cartridges may have prepackaged fluids put on the cartridges during assembly.
[Para 99] As to the waste reservoir, the porous vent membrane may be moved further from the inlet since the entry of water would tend to
seal the vent. The vent may be better moved to the opposite side of the reservoir without the membrane. However, for the finished cartridge the membrane or something like it may be used in the new vent location. The old vent may be intentionally plugged. [Para 100] The cartridge may have three bellows valves that may be activated with a single lever on the edge of the cartridge. However, the valves may be individually activated to aid in filling. The reservoirs may be bench filled with a Harvard syringe pump. There may be fluid creep between the reservoirs when moving between reservoirs which could be due to a flexible surface of the reservoir wall. Individually activated valves that could be closed after a reservoir is filled may alleviate this problem. The volume of the large reservoir is not the same among the cartridges which may be due to reservoir compliance. Increased wall thickness may solve this issue, although it might have an effect on the optics referencing. There may be a concern relative to making electrical contact to the sensor since it would be recessed deep into the cartridge.
[Para 101 ] Cartridge 1 51 may be modified to accommodate advanced optics for the cytometer system. There are several approaches that may be achieved. Figure 16 shows a cross-section view of the top side of the cartridge 1 50 showing a detector cone 244 and a source cone 243 relative to the flow channel windows 241 and 242, respectively. A counter-sunk opening 251 on the detector side may be sunk below the broad surface 246 of the cartridge 1 50 where a flow channel 247 is situated within thin layers 253 close to the general surface 245
opposite of surface 246 and close to a top surface 252 of opening 251 . The source cone 243 may have an angle 281 of about a 20 degree wide spread. The direction of the light source cone 243 to the flow channel 247 may be at an angle 282 of about 45 degrees relative to the surface 245. There appears to be no interference of the cartridge window 242 relative to cone 243 since the window may be rather close to the surface 245. The flow channel 247 may contain a core stream that flows upwards out of the sheet containing the Figure 16. Alternatively, the core stream may instead flow downward into the sheet of the figure; however, there might be a greater probability of air being taken into the core stream. The source cone and the detector cone are set at an angle relative to the window surface or flow channel of the cartridge so that there is not a line-of-sight or direct impingement of the source light through the flow channel to the detector. Nominally, the directions of the source and detector cones may be at about 90 degrees relative to each other. [Para 102] Detector cone 244 may have an angle width 283 of about 60 degrees. The direction 284 of the detector cone relative to the surface 252 may be about 45 degrees. That means the lower portion of detector cone 244 towards the surface 246 may be at about an angle of 1 5 degrees or so relative to surfaces 246 and 252. The length 275, thicknesses 276, 277 and 295, and lengths 278 and 279 may affect the clearances for the respective cones. The window thickness 277 may be about one-sixty-fourth of an inch, i.e., 0.01 5625 in. The step or depth 295 of the opening 251 in the
cartridge 1 50 may be about one-eighth of an inch, i.e., 0.1 25 in. Many of the dimensions may be available or inferable from Figures 14b and 1 5a. Since the flow channel 247 is close to surface 252 and the angle of cone 244 is wide and the direction of the cone is significantly to one side, the cone 244 may encounter an obstruction at the edge of opening 251 on or near the surface 246. This obstruction may prevent some light having significant data from being detected from cone 244. Some of the light being provided to the flow channel 247 may be occluded. This obstruction may prevent proper illumination of the flow channel. The consequence may include detected signals with low signal to noise ratios or no signals which may have been present were it not for the obstruction. The obstruction may be eliminated by removing some of the material from the surface 246 of the cartridge 1 50 at the edge of the opening 251 to make a clearance for cone 244 at a new surface 254, as shown in Figure 1 7.
[Para 103] Another approach to the detector cone 244 obstruction issue may be to swap the positions of the light source and detector with the corresponding cones 243 and 244, respectively, as shown in Figure 1 8. Then source cone 243 may be facing window 241 proximate to surface 252 of opening 251. With the direction of the source cone 243 relative to the surface 252 being at an angle 282 of about 45 degrees and the cone 243 having an angle of 281 about 20 degrees wide, the portion the cone 243 closest to surface 252 may be at an angle of about 35 degrees relative to a plane parallel to the
surfaces 246 and 252. It is apparent that the source cone 243 easily clears the edge of the opening 251 proximate to surface 246 of the cartridge 1 50. On the other side of the cartridge having surface 245, the wide detector cone 244 appears to encounter no obstruction relative to window 242 and surface 245 of the cartridge 1 50. The reason apparently is that the flow channel 247 and its encompassing structure of thin films 253 are so close the surface 245 that there is virtually no obstruction from a small edge of window 242. [Para 104] If the 20 degree source cone 243 is replaced with a 45 degree angle 285 or greater source cone 248 at window 241 , as shown in Figure 1 9; there might be a slight obstruction of the cone 248 at the edge of the opening 251 at surface 246, if cone 248 were rotated further to the right than illustrated by an angle 286 in the Figure. If this obstruction or occluding occurred, it may be cleared by removing some of the material from the cartridge 1 50 at the edge of the opening 251 and surface 240, as shown in Figure 1 7. Also added may be a 30 degree angle 287 detector cone 249 for detecting scattered light and/or direct light. Cone 249 direction angle 288 may be about 45 degrees. In the configuration of Figure 1 9, detector cone 244 appears situated adequately in that no obstruction is apparent. [Para 105] However, several other approaches that do not involve removal of cartridge 1 50 material for any of wide cone arrangements may solve the above-noted obstruction issues. One is to turn the orientation of the cut-out opening 251 in the plane of surface 246 about 90 degrees clockwise or counterclockwise relative to the source
and detector cones. The dimensions 255 and 256 of the opening 251 may be approximately about 1 5 by 20 millimeters, respectively. The dimensions 257 and 258 of window 241 , 242 may be approximately 2 by 5 millimeters, respectively. The dimensions may have different values. Dimensions 289 and 291 may be calculated. Figure 21 shows the shorter dimension 255 parallel to the direction of the slant of the cones 243, 244, 248 and 249, along the length of flow channel 247. Thus, in Figure 21 , the orientation angles 293 and 294 of cones 243 and 244, respectively, may be about 90 degrees. This orientation of the flow channel 247 is also evident in Figures 16-19. The turning the opening 251 about 90 degrees may put the longer dimension 256 (about 33 percent longer) of the opening 251 and the direction of the flow channel 247 approximately parallel to the cone slants so as to provide more clearance relative to the edge of the opening 251 at surface 246 to avoid being be an obstruction or occlusion to, for instance, cones 244 or 248 at an edge of the surface 246 on the side of cartridge 1 50.
[Para 106] Figures 20 and 21 show the source cone 243 and detector 244 configuration of Figure 16 accommodated by the longer dimension 256 of opening 251 , which may be accomplished as noted above. The approach here would involve shifting the orientation of the slants of the axes of the source and detector cones 243, 244, 248 and 249 to be towards the direction of the flow channel 247. Figure 21 is an end view of a cross-section of opening 251. Contrary to Figures 20 and 21 , Figures 16-19 show the angles of the detector and source
cones as transverse to the direction of the flow channel 247. Figures
16-21 are not necessarily drawn to scale.
[Para 107] In the present specification, some of the matter may be of a hypothetical or prophetic nature although stated in another manner or tense.
[Para 108] Although the invention has been described with respect to at least one illustrative example, many variations and modifications will become apparent to those skilled in the art upon reading the present specification. It is therefore the intention that the appended claims be interpreted as broadly as possible in view of the prior art to include all such variations and modifications.