WO2010007451A1 - Nanosensor for determining the concentrations of physiologically active inorganic ions on subcellular level - Google Patents
Nanosensor for determining the concentrations of physiologically active inorganic ions on subcellular level Download PDFInfo
- Publication number
- WO2010007451A1 WO2010007451A1 PCT/HU2008/000109 HU2008000109W WO2010007451A1 WO 2010007451 A1 WO2010007451 A1 WO 2010007451A1 HU 2008000109 W HU2008000109 W HU 2008000109W WO 2010007451 A1 WO2010007451 A1 WO 2010007451A1
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- linker
- optionally
- carrier
- reacted
- functional group
- Prior art date
Links
- 229910001410 inorganic ion Inorganic materials 0.000 title claims abstract description 15
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 claims abstract description 33
- 238000000034 method Methods 0.000 claims abstract description 28
- 239000003550 marker Substances 0.000 claims abstract description 20
- 239000002245 particle Substances 0.000 claims abstract description 16
- 239000000377 silicon dioxide Substances 0.000 claims abstract description 16
- 239000000412 dendrimer Substances 0.000 claims abstract description 14
- 229920000736 dendritic polymer Polymers 0.000 claims abstract description 14
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 claims abstract description 10
- 229910000510 noble metal Inorganic materials 0.000 claims abstract description 10
- 229910052799 carbon Inorganic materials 0.000 claims abstract description 9
- 235000012239 silicon dioxide Nutrition 0.000 claims abstract description 9
- 150000002500 ions Chemical class 0.000 claims description 47
- 125000000524 functional group Chemical group 0.000 claims description 36
- 125000000217 alkyl group Chemical group 0.000 claims description 16
- 150000001875 compounds Chemical class 0.000 claims description 15
- 239000012634 fragment Substances 0.000 claims description 12
- 230000008878 coupling Effects 0.000 claims description 9
- 238000010168 coupling process Methods 0.000 claims description 9
- 238000005859 coupling reaction Methods 0.000 claims description 9
- 239000012472 biological sample Substances 0.000 claims description 5
- 230000000295 complement effect Effects 0.000 claims description 4
- 239000002243 precursor Substances 0.000 claims description 4
- 239000000975 dye Substances 0.000 description 59
- 125000005647 linker group Chemical group 0.000 description 18
- 238000006243 chemical reaction Methods 0.000 description 16
- 239000000203 mixture Substances 0.000 description 12
- 210000004027 cell Anatomy 0.000 description 11
- 239000000047 product Substances 0.000 description 10
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 description 8
- 239000002105 nanoparticle Substances 0.000 description 8
- 230000008569 process Effects 0.000 description 8
- 229910001415 sodium ion Inorganic materials 0.000 description 8
- 230000015572 biosynthetic process Effects 0.000 description 7
- 239000000969 carrier Substances 0.000 description 7
- 229910052681 coesite Inorganic materials 0.000 description 7
- 229910052906 cristobalite Inorganic materials 0.000 description 7
- 229910052682 stishovite Inorganic materials 0.000 description 7
- 230000008685 targeting Effects 0.000 description 7
- 229910052905 tridymite Inorganic materials 0.000 description 7
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 6
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-Dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 6
- 241000700159 Rattus Species 0.000 description 5
- 238000005259 measurement Methods 0.000 description 5
- UGJCNRLBGKEGEH-UHFFFAOYSA-N sodium-binding benzofuran isophthalate Chemical compound COC1=CC=2C=C(C=3C(=CC(=CC=3)C(O)=O)C(O)=O)OC=2C=C1N(CCOCC1)CCOCCOCCN1C(C(=CC=1C=2)OC)=CC=1OC=2C1=CC=C(C(O)=O)C=C1C(O)=O UGJCNRLBGKEGEH-UHFFFAOYSA-N 0.000 description 5
- 239000000243 solution Substances 0.000 description 5
- 239000000126 substance Substances 0.000 description 5
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 4
- PEEHTFAAVSWFBL-UHFFFAOYSA-N Maleimide Chemical compound O=C1NC(=O)C=C1 PEEHTFAAVSWFBL-UHFFFAOYSA-N 0.000 description 4
- 210000004556 brain Anatomy 0.000 description 4
- 125000004093 cyano group Chemical group *C#N 0.000 description 4
- PCHJSUWPFVWCPO-UHFFFAOYSA-N gold Chemical compound [Au] PCHJSUWPFVWCPO-UHFFFAOYSA-N 0.000 description 4
- 239000010931 gold Substances 0.000 description 4
- 229910052737 gold Inorganic materials 0.000 description 4
- 210000003093 intracellular space Anatomy 0.000 description 4
- 238000002360 preparation method Methods 0.000 description 4
- 230000001105 regulatory effect Effects 0.000 description 4
- 239000007787 solid Substances 0.000 description 4
- WFDIJRYMOXRFFG-UHFFFAOYSA-N Acetic anhydride Chemical compound CC(=O)OC(C)=O WFDIJRYMOXRFFG-UHFFFAOYSA-N 0.000 description 3
- -1 Ca2+ ions Chemical class 0.000 description 3
- QGZKDVFQNNGYKY-UHFFFAOYSA-N ammonia Natural products N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 3
- 230000008859 change Effects 0.000 description 3
- 239000003153 chemical reaction reagent Substances 0.000 description 3
- 230000006870 function Effects 0.000 description 3
- 239000003446 ligand Substances 0.000 description 3
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 3
- 238000006862 quantum yield reaction Methods 0.000 description 3
- 239000000376 reactant Substances 0.000 description 3
- 239000012265 solid product Substances 0.000 description 3
- 125000003396 thiol group Chemical class [H]S* 0.000 description 3
- WYTZZXDRDKSJID-UHFFFAOYSA-N (3-aminopropyl)triethoxysilane Chemical compound CCO[Si](OCC)(OCC)CCCN WYTZZXDRDKSJID-UHFFFAOYSA-N 0.000 description 2
- GBQYMXVQHATSCC-UHFFFAOYSA-N 3-triethoxysilylpropanenitrile Chemical compound CCO[Si](OCC)(OCC)CCC#N GBQYMXVQHATSCC-UHFFFAOYSA-N 0.000 description 2
- BVKZGUZCCUSVTD-UHFFFAOYSA-M Bicarbonate Chemical compound OC([O-])=O BVKZGUZCCUSVTD-UHFFFAOYSA-M 0.000 description 2
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 2
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 2
- 229910008423 Si—B Inorganic materials 0.000 description 2
- QAOWNCQODCNURD-UHFFFAOYSA-N Sulfuric acid Chemical compound OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 description 2
- 210000003050 axon Anatomy 0.000 description 2
- 230000031018 biological processes and functions Effects 0.000 description 2
- 230000033228 biological regulation Effects 0.000 description 2
- 239000000872 buffer Substances 0.000 description 2
- 230000004094 calcium homeostasis Effects 0.000 description 2
- 125000004432 carbon atom Chemical group C* 0.000 description 2
- 239000000084 colloidal system Substances 0.000 description 2
- 230000001419 dependent effect Effects 0.000 description 2
- 239000012153 distilled water Substances 0.000 description 2
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 description 2
- 230000007062 hydrolysis Effects 0.000 description 2
- 238000006460 hydrolysis reaction Methods 0.000 description 2
- 125000002887 hydroxy group Chemical group [H]O* 0.000 description 2
- 238000011534 incubation Methods 0.000 description 2
- 238000004519 manufacturing process Methods 0.000 description 2
- GLDOVTGHNKAZLK-UHFFFAOYSA-N octadecan-1-ol Chemical compound CCCCCCCCCCCCCCCCCCO GLDOVTGHNKAZLK-UHFFFAOYSA-N 0.000 description 2
- 230000003647 oxidation Effects 0.000 description 2
- 238000007254 oxidation reaction Methods 0.000 description 2
- 229910001414 potassium ion Inorganic materials 0.000 description 2
- 230000009257 reactivity Effects 0.000 description 2
- 239000003381 stabilizer Substances 0.000 description 2
- 230000000087 stabilizing effect Effects 0.000 description 2
- 239000000725 suspension Substances 0.000 description 2
- 238000003786 synthesis reaction Methods 0.000 description 2
- 150000003573 thiols Chemical class 0.000 description 2
- FYSNRJHAOHDILO-UHFFFAOYSA-N thionyl chloride Chemical compound ClS(Cl)=O FYSNRJHAOHDILO-UHFFFAOYSA-N 0.000 description 2
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Chemical compound O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 2
- RYHBNJHYFVUHQT-UHFFFAOYSA-N 1,4-Dioxane Chemical compound C1COCCO1 RYHBNJHYFVUHQT-UHFFFAOYSA-N 0.000 description 1
- YOETUEMZNOLGDB-UHFFFAOYSA-N 2-methylpropyl carbonochloridate Chemical compound CC(C)COC(Cl)=O YOETUEMZNOLGDB-UHFFFAOYSA-N 0.000 description 1
- 239000012103 Alexa Fluor 488 Substances 0.000 description 1
- 208000024827 Alzheimer disease Diseases 0.000 description 1
- VHUUQVKOLVNVRT-UHFFFAOYSA-N Ammonium hydroxide Chemical compound [NH4+].[OH-] VHUUQVKOLVNVRT-UHFFFAOYSA-N 0.000 description 1
- 241000282693 Cercopithecidae Species 0.000 description 1
- KRKNYBCHXYNGOX-UHFFFAOYSA-K Citrate Chemical compound [O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O KRKNYBCHXYNGOX-UHFFFAOYSA-K 0.000 description 1
- KCXVZYZYPLLWCC-UHFFFAOYSA-N EDTA Chemical compound OC(=O)CN(CC(O)=O)CCN(CC(O)=O)CC(O)=O KCXVZYZYPLLWCC-UHFFFAOYSA-N 0.000 description 1
- VGGSQFUCUMXWEO-UHFFFAOYSA-N Ethene Chemical group C=C VGGSQFUCUMXWEO-UHFFFAOYSA-N 0.000 description 1
- 239000005977 Ethylene Substances 0.000 description 1
- 241000282414 Homo sapiens Species 0.000 description 1
- 101000635799 Homo sapiens Run domain Beclin-1-interacting and cysteine-rich domain-containing protein Proteins 0.000 description 1
- 102000008394 Immunoglobulin Fragments Human genes 0.000 description 1
- 108010021625 Immunoglobulin Fragments Proteins 0.000 description 1
- 102000004310 Ion Channels Human genes 0.000 description 1
- KWYUFKZDYYNOTN-UHFFFAOYSA-M Potassium hydroxide Chemical compound [OH-].[K+] KWYUFKZDYYNOTN-UHFFFAOYSA-M 0.000 description 1
- 102100030852 Run domain Beclin-1-interacting and cysteine-rich domain-containing protein Human genes 0.000 description 1
- 208000034189 Sclerosis Diseases 0.000 description 1
- 239000006087 Silane Coupling Agent Substances 0.000 description 1
- XUIMIQQOPSSXEZ-UHFFFAOYSA-N Silicon Chemical group [Si] XUIMIQQOPSSXEZ-UHFFFAOYSA-N 0.000 description 1
- VMHLLURERBWHNL-UHFFFAOYSA-M Sodium acetate Chemical compound [Na+].CC([O-])=O VMHLLURERBWHNL-UHFFFAOYSA-M 0.000 description 1
- BOTDANWDWHJENH-UHFFFAOYSA-N Tetraethyl orthosilicate Chemical compound CCO[Si](OCC)(OCC)OCC BOTDANWDWHJENH-UHFFFAOYSA-N 0.000 description 1
- 125000002777 acetyl group Chemical group [H]C([H])([H])C(*)=O 0.000 description 1
- 230000004913 activation Effects 0.000 description 1
- 150000001263 acyl chlorides Chemical group 0.000 description 1
- 230000001476 alcoholic effect Effects 0.000 description 1
- 125000003277 amino group Chemical group 0.000 description 1
- 229910021529 ammonia Inorganic materials 0.000 description 1
- 239000012062 aqueous buffer Substances 0.000 description 1
- 239000007864 aqueous solution Substances 0.000 description 1
- 239000012298 atmosphere Substances 0.000 description 1
- 230000008901 benefit Effects 0.000 description 1
- 230000000903 blocking effect Effects 0.000 description 1
- 230000036772 blood pressure Effects 0.000 description 1
- 238000009835 boiling Methods 0.000 description 1
- 238000006664 bond formation reaction Methods 0.000 description 1
- 210000002449 bone cell Anatomy 0.000 description 1
- 239000002041 carbon nanotube Substances 0.000 description 1
- 229910021393 carbon nanotube Inorganic materials 0.000 description 1
- 230000003915 cell function Effects 0.000 description 1
- 230000009134 cell regulation Effects 0.000 description 1
- 230000001413 cellular effect Effects 0.000 description 1
- 230000005754 cellular signaling Effects 0.000 description 1
- 210000001175 cerebrospinal fluid Anatomy 0.000 description 1
- 238000007385 chemical modification Methods 0.000 description 1
- 239000003638 chemical reducing agent Substances 0.000 description 1
- 229940075614 colloidal silicon dioxide Drugs 0.000 description 1
- 238000004440 column chromatography Methods 0.000 description 1
- 230000001276 controlling effect Effects 0.000 description 1
- 238000001212 derivatisation Methods 0.000 description 1
- 201000010099 disease Diseases 0.000 description 1
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 description 1
- 238000004821 distillation Methods 0.000 description 1
- 230000000694 effects Effects 0.000 description 1
- 238000001704 evaporation Methods 0.000 description 1
- 230000008020 evaporation Effects 0.000 description 1
- 230000005284 excitation Effects 0.000 description 1
- 238000007306 functionalization reaction Methods 0.000 description 1
- 238000002523 gelfiltration Methods 0.000 description 1
- 150000002344 gold compounds Chemical class 0.000 description 1
- 230000004217 heart function Effects 0.000 description 1
- 230000000971 hippocampal effect Effects 0.000 description 1
- 125000004356 hydroxy functional group Chemical group O* 0.000 description 1
- 230000002401 inhibitory effect Effects 0.000 description 1
- 230000003834 intracellular effect Effects 0.000 description 1
- 208000028867 ischemia Diseases 0.000 description 1
- 239000007788 liquid Substances 0.000 description 1
- 238000012423 maintenance Methods 0.000 description 1
- FPYJFEHAWHCUMM-UHFFFAOYSA-N maleic anhydride Chemical compound O=C1OC(=O)C=C1 FPYJFEHAWHCUMM-UHFFFAOYSA-N 0.000 description 1
- 125000005439 maleimidyl group Chemical group C1(C=CC(N1*)=O)=O 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 238000000691 measurement method Methods 0.000 description 1
- 239000002082 metal nanoparticle Substances 0.000 description 1
- 230000002107 myocardial effect Effects 0.000 description 1
- 230000001537 neural effect Effects 0.000 description 1
- 230000004751 neurological system process Effects 0.000 description 1
- 210000002569 neuron Anatomy 0.000 description 1
- 230000003955 neuronal function Effects 0.000 description 1
- 238000010534 nucleophilic substitution reaction Methods 0.000 description 1
- 238000005580 one pot reaction Methods 0.000 description 1
- 230000003287 optical effect Effects 0.000 description 1
- 238000006053 organic reaction Methods 0.000 description 1
- 238000001139 pH measurement Methods 0.000 description 1
- 230000008058 pain sensation Effects 0.000 description 1
- 230000037361 pathway Effects 0.000 description 1
- 230000002093 peripheral effect Effects 0.000 description 1
- 230000000704 physical effect Effects 0.000 description 1
- 238000012545 processing Methods 0.000 description 1
- QQONPFPTGQHPMA-UHFFFAOYSA-N propylene Natural products CC=C QQONPFPTGQHPMA-UHFFFAOYSA-N 0.000 description 1
- 125000004805 propylene group Chemical group [H]C([H])([H])C([H])([*:1])C([H])([H])[*:2] 0.000 description 1
- 102000004169 proteins and genes Human genes 0.000 description 1
- 108090000623 proteins and genes Proteins 0.000 description 1
- 239000002096 quantum dot Substances 0.000 description 1
- 239000011541 reaction mixture Substances 0.000 description 1
- 238000000926 separation method Methods 0.000 description 1
- 230000019491 signal transduction Effects 0.000 description 1
- 210000002460 smooth muscle Anatomy 0.000 description 1
- 239000011734 sodium Substances 0.000 description 1
- 239000001632 sodium acetate Substances 0.000 description 1
- 235000017281 sodium acetate Nutrition 0.000 description 1
- ZSOMPVKQDGLTOT-UHFFFAOYSA-J sodium green Chemical compound C[N+](C)(C)C.C[N+](C)(C)C.C[N+](C)(C)C.C[N+](C)(C)C.COC=1C=C(NC(=O)C=2C=C(C(=CC=2)C2=C3C=C(Cl)C(=O)C=C3OC3=CC([O-])=C(Cl)C=C32)C([O-])=O)C(OC)=CC=1N(CCOCC1)CCOCCOCCN1C(C(=C1)OC)=CC(OC)=C1NC(=O)C1=CC=C(C2=C3C=C(Cl)C(=O)C=C3OC3=CC([O-])=C(Cl)C=C32)C(C([O-])=O)=C1 ZSOMPVKQDGLTOT-UHFFFAOYSA-J 0.000 description 1
- 239000002904 solvent Substances 0.000 description 1
- 241000894007 species Species 0.000 description 1
- 238000003756 stirring Methods 0.000 description 1
- 125000004149 thio group Chemical group *S* 0.000 description 1
- 150000007944 thiolates Chemical class 0.000 description 1
Classifications
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/84—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving inorganic compounds or pH
Definitions
- the invention relates to sensors applicable to determine the concentrations of physiologically active inorganic ions on subcellular level.
- the invention also relates to methods for preparing these sensors and to the use of the sensors for the above purpose.
- Physiologically active inorganic ions play a key role in the regulation of cell functions.
- Na + K + , Ca 2+ , H + , Cl " and HCO 3 " ions regulate or initiate several processes which are vital for the appropriate functioning of cells.
- Na + ions participate in both central and peripheral signal transduction processes, in mediating neuronal functions, in controlling cellular energy maintenance and in the formation of pain sensation, furthermore they have a central role in regulating heart function and blood pressure.
- K + ions which are present in higher concentrations in the intracellular space, exert their regulating functions mostly in parallel with those of Na + ions which predominate in the extracellular region.
- Cl " ions have a central role in the inhibitory neural processes and, together with HCO 3 " ions, exert important functions in regulating cell volume.
- Ca 2+ ions play a central role, among others, in the functioning of smooth muscles and in the regulation of cellular signalling pathways and myocardial processes. Changes in H + ion concentrations (i.e. in pH) influence among others neural conduction processes and Ca 2+ homeostasis, and participate in the proper functioning of bone cells.
- the ion selective dye depending on its chemical and physical properties, enters either the extracellular or the intracellular space and distributes there almost evenly. Consequently, with ion selective dyes only the average ion concentration can be determined in the space concerned, and no information can be obtained on the ion concentration present at the region of the cell surface or of the intracellular space where the biological process actually takes place. Although these average values do have scientific and diagnostic value, much valuable pieces of information would be obtainable in the knowledge of the ion concentration prevailing at the actual place of the biological process.
- dyes could be targeted with antibodies, because, depending on the dimension ratios, 3-6 dye molecules can be coupled to an antibody without affecting its targeting properties.
- This method has been successfully applied in targeting various dyes of high quantum yield which emit a very intense fluorescent light upon unit exciting energy, and in targeting quantum dots which produce even more intense signals [Kim et al: Anal. Chim. Acta 163-170 (2006); Kaul et al: Biochem. Cell. Biol. 133-140 (2007); Horwath et al: Proc. Natl. Acad. Sci. USA 7583-7588 (2005)].
- Fluorescent markers targeted by this method are, however, insensitive to the changes which occur in their environment (among others, to the concentration of physiological ions and to its variation); their signal intensity depends solely on the intensity of the exciting light.
- this method is well applicable to label specific cell parts e.g. for anatomic purposes, but it does not give information on the functioning of the labelled parts.
- This method is inapplicable for ion selective dyes, which are typical representatives of molecules with low quantum yield producing no detectable signal in a concentration which can be targeted with antibodies (3-6 molecules for one antibody).
- Our aim was to provide a sensor which enables the subcellular targeting of ion selective dyes in amounts which produce a detectable signal, and, upon a simple subsequent treatment, can be directed to any desired target.
- These aims can be fully met with a sensor wherein the molecules of the ion selective dye are bound to a carrier and/or incorporated into a carrier, and at least one secondary antibody and optionally one or more fluorescent marker(s) is(are) bound to the sensor.
- the invention relates to a sensor for determining the concentrations of physiologically active inorganic ions on subcellular level.
- the sensor according to the invention corresponds to formula (I)
- H J is a silicon dioxide, noble metal or carbon carrier particle with an average diameter of 10-200 nm or a dendrimer with an average diameter of 10-200 nm optionally comprising dye molecules which are selectively sensitive to a physiologically active inorganic ion,
- A is a secondary antibody
- X is the residue of a dye molecule selectively sensitive to a physiologically active inorganic ion
- Y is the residue of a fluorescent marker molecule, m is 1-3, n is at least 10, but if (R) is a dendrimer, n may also be 0-9, p is zero or a positive number not exceeding n/10,
- L 1 is a linker of the structure -F 1 -B-F 2 -,
- L 2 is a linker of the structure -FyB'-F ⁇ -
- L 3 is a linker of the structure -F" r B"-F" 2 -, wherein
- F 1 , F 1 ., and F represent residues of functional groups on the carrier and may be the same or different,
- B, B' and B" represent 1-10 membered alkyl chains optionally having a chain complement on their part attached to F 1 , F', or F", and may be the same or different,
- F 2 is a functional group coupling dye molecule residue X to alkyl chain B
- F' 2 is a functional group coupling secondary antibody A to alkyl chain B'
- F" 2 is a functional group coupling fluorescent marker molecule residue Y to alkyl chain B".
- the ion selective dye molecules are bound by covalent bonds to the surface of the carrier when the carrier is silicon dioxide, a noble metal or carbon, or are bound by covalent bonds to the surface of the carrier and/or are physically bound in the hollows of the carrier when the carrier is a dendrimer [for the preparation of dendrimers see e.g. Grayson et al: Chem. Rev. 101, 3819-3867 (2001 ); Crespo et al: Chem. Rev. ⁇ 05, 1663- 1681 (2005); Hwang et al: JACS 128, 7505-7509 (2006)].
- the carrier holds at least 10 ion selective dye molecules (n is at least 10).
- the upper limit of the number of ion selective dye molecules bound to or incorporated into the carrier is not decisive and depends practically on the particle size of the carrier and on the number of functional groups on the carrier. It is preferred to attach as many ion selective dye molecule to a carrier nanoparticle as possible, because in this way the targeted sensor would produce a more intense signal.
- the particle size of the carrier is preferably 20-150 nm, more preferably 50- 100 nm.
- linker L 1 Upon an appropriate combination of the building blocks of linker L 1 any desired ion selective dye molecule can be attached to the silicon dioxide, noble metal, carbon or dendrimer carrier.
- linker L 1 is described in more detail when discussing the preparation of the sensor.
- ion selective dye molecule or "dye molecule selective to a physiological ion” encompasses not only dye molecules which react to a single ion type (e.g. only to Na + or only to K + ions) with a concentration-dependent change in fluorescence, but also covers those which give such a reaction with more than one ion type but react to one of the ion types with a fluorescence change of at least threefold intensity. Obviously, it is preferred to use dye molecules with the highest possible selectivity. A broad choice of such dye molecules is known from the literature. Examples of Na + selective dye molecules are those sold under the trade names SBFI, Sodium Green and CoroNa Green.
- a second important characteristic of the sensor according to the invention is that it has 1-3 (preferably only 1) secondary antibody bound to the carrier with a covalent bond.
- secondary antibody refers to an antibody fragment which recognizes the conservative region of all of the antibodies of a given species (human, monkey, rat, etc.). These secondary antibodies are known; of them the rat-specific Fab' antibody is mentioned as an example.
- the universal applicability of the sensor according to the invention is provided just by the fact that it contains a secondary antibody and not an antibody itself which performs targeting (further on: primary antibody). Due to the presence of the secondary antibody the once produced and marketed sensor can be coupled before use to any primary antibody which corresponds to the cell region to be examined, and the sensor is targeted by this latter primary antibody.
- the architecture of the nanosensor according to the invention wherein all of the ion selective dye molecules are bound to the surface of the carrier and the way of targeting it to a particular site is shown in Fig. 1.
- fluorescent marker molecules already mentioned at the description of the state of art which produce a fluorescent signal with an intensity independent of the concentration of the surrounding ions can be used for this purpose. These fluorescent marker molecules are also termed as marker dyes. It is preferred to use marker dyes which have a greater quantum yield than the ion selective dye. In order to make the signal of the marking dye clearly distinguishable from the signal of the ion selective dye it is preferred to use a marking dye/ion selective dye pair which emit fluorescent light at different wavelengths.
- the marker dye is available as one bound to the appropriate primary antibody one can also proceed so that the sensor is treated before use with this marker dye/primary antibody complex instead of the targeting primary antibody. In this instance the presence of a marker dye in the sensor according to the invention may be unnecessary.
- the sensors according to the invention are prepared as follows: (a) when the carrier is silicon dioxide, a noble metal or carbon, fragment -F 1 -B-Z of linker L 1 , fragment -FyB'-Z' of linker L 2 and optionally fragment -F" r B"-Z" of linker L 3 (in these formulae Z, Z' and Z" represent functional groups which are precursors of the F 2 , F' 2 and F" 2 moieties, respectively, and the other symbols are as defined above) are built up on the functional groups of the carrier by methods known per se, and the resulting product is reacted with a compound of formula R-X, with a compound of formula R'-A and optionally with a compound of formula R"-Y (in these formulae R is a functional group which, when reacted with Z, forms the F 2 moiety, R' is a functional group which, when reacted with Z 1 , forms the F 2 moiety, and R" is a functional group which, when reacted with Z",
- Stober synthesis is a well known method for producing silicon dioxide carriers, which enables one to produce particles of various size over a broad scale of the nanometer range (between 20 nm and 200 nm) as stable sols in aqueous or alcoholic media.
- This method is particularly preferable also because the size of the resulting particles is easy to control and the surface of the particles can be easily reacted with reactants capable of forming the required functional groups [Kazakevich et al: Langmuir 18, 3117-3122 (2002)].
- alkyl chains B, B 1 and B" are 1-10 membered alkyl chains, which means that 1-10 carbon atoms are located between moiety F 1 (plus the chain complement) and moiety F 2 .
- the alkyl chains may be optionally branched.
- Alkyl chain B which is a member of the linker to the ion selective dye molecule, is preferably a 2-6 membered one; alkyl chain B", which is a member of the linker to the marker dye (if present), may be of similar size.
- Alkyl chain B 1 which is a member of the linker to the secondary antibody, is preferably longer than alkyl chain B and/or B".
- the terminal group of the thus-formed side chain is not yet suitable for direct reaction with the secondary antibody and/or with the various dye molecules or with the reactive derivatives of these substances, the terminal group is converted into a functional group capable for such reactions by methods known per se.
- a terminal -CN group can be converted into a carboxy group by hydrolysis, or a terminal amino group can be converted into a maleimide group for reaction with the secondary antibody.
- the side chains can be formed on the surface of the carrier in a single step or in more consecutive steps.
- the consecutive reactions can also be performed as a one-pot synthesis. Thereafter the carrier with the desired side chains is reacted with a reactive derivative of the ion selective dye, with a reactive derivative of the secondary antibody, and optionally with a reactive derivative of the marker dye. These reactions can also be performed in a single step or in more steps.
- reactive derivative refers to either the entities to be coupled (dye molecules, secondary antibody) if they do contain functional groups, or to reactive compounds formed therefrom by previous functionalization.
- the secondary antibody can be reacted directly with certain functional groups (e.g. maleimide or thio groups).
- certain dye molecules should be functionalized first to introduce groups R and R" capable of reacting with groups Z and Z" of the side chains on the carrier
- SBFI of formula (II) (a Na + -selective dye) can be subjected to partial hydrolysis to convert one of the acetyl groups into hydroxy group which is now capable to react with the carboxy terminal groups of the side chain on the carrier.
- the carboxy group of Alexa Fluor 488 (a marker dye) can be converted into acyl chloride group in order to increase its reactivity for reactions with amino, hydroxy or carboxy terminal groups.
- linkers L 1 , L 2 and L 3 furthermore side chains -F 1 -B-Z, -FyB'-Z' and -F" r B"-Z" leading to their formation, may be the same or different.
- all the three side chains and/or linkers (or two of them) are the same, carefully selected reagent ratios and accurately controlled reaction conditions are required in order to produce particles comprising moieties X, A (and optionally Y) in the desired ratio. Therefore it is more appropriate to form side chains wherein at least terminal groups Z and Z' differ from one another (consequently in the resulting sensor L 1 and L 2 will also be different).
- the rate of this replacement process depends on the chain length [Hostetler et al: Langmuir 1.5, 3782-3789 (1999)], on the types of the exiting and entering thiols [Montalti et al: Langmuir 19, 5171-5174 (2003)], on the charge of the nanoparticle [Song et al: J. Am. Chem. Soc. 124, 7096-7102 (2002)] and on the oxidation processes [Pasquato et al: Chem. Commun. 2253-2254 (2000)].
- the last step is a change in the functional terminal groups of the stabilizing agent for the nanoparticle.
- Peptid bond formation or nucleophilic substitution reactions may proceed on the surface [Pasquato et al. loc. cit.; Templeton et al. loc. cit.].
- a characteristic feature of the reactions proceeding on nanoparticles is that the reactivity of the thin thiol layer which covers the strongly curved surface differs from that appearing on a plane surface. This effect can be utilized to perform organic reactions (such as SN 2 type reactions) on the surface of the nanoparticle which cannot proceed on a plane surface due to steric hindrance.
- the side chains formed on a noble metal carrier comprise most frequently thiol groups as F 1 , Z, Z' and/or Z" moieties, and the side chains differ from one another most frequently in the number of the members of alkyl chains B, B' and B".
- Thiol groups can be reacted usually directly with secondary antibodies, whereas the dye molecules comprising groups X and Y are usually to be be converted into reactive forms by appropriate derivatization steps.
- Carbon nanotubes are characteristic representatives of carbon carriers. Direct oxidation of the carbon atoms on their outer surface is the simplest way of their chemical modification.
- the surface functional groups can be converted easily into other groups, e.g. they can be activated with thionyl chloride and esterified then with octadecanol [Hammon et al: Appl. Phys. A, Materials Science & Processing 74, 333 (2002)]. These reactions can be utilized to advantage to bind dye molecules and secondary antibodies to carbon carriers.
- dendrimers e.g. those referred to above, can be easily completed at an appropriate stage with the introduction of dye molecules selective to physiological ions.
- Side chains for coupling secondary antibodies and optionally further (ion selective and/or marker) dye molecules can be formed on the surfaces of the resulting dendrimers by methods discussed above.
- dendrimers comprising no ion selective dye molecules in their hollows can also be utilized as carriers. For these carriers n must be at least 10.
- the sensor according to the invention is utilized for determining the concentrations of physiological ions in biological samples by conventional fluorescent measurement techniques (measurement of the starting fluorescence, adding to a biological sample, measurement of the final fluorescence) with the difference that a primary antibody which targets the sensor according to the invention to the cell region to be examined is also added to the biological sample.
- a primary antibody which targets the sensor according to the invention to the cell region to be examined is also added to the biological sample.
- primary antibodies carrying fluorescent marker dye molecules can also be used for this purpose.
- the sensor according to the invention is treated with the primary antibody preferably before adding it to the biological sample.
- the mixture is evaporated under mild conditions to obtain the colloidal SiO 2 modified with two types of side chains [-O-Si-(CH 2 ) 3 -NH 2 and -O-Si-(CH 2 ) 2 -CN] as a solid substance.
- step (e) is coupled to the -COOH terminal groups of the side chains of the product obtained in step (d) as follows: 0.5 cm 3 of isobutyl chloroformate are added dropwise at O 0 C to a stirred suspension of 0.2 g of the product obtained in step (d) in 10 cm 3 of dimethyl formamide, and the mixture is allowed to warm to room temperature. After 2 hours of stirring a solution of 0.1 g of the product obtained in step (e) in 5 cm 3 of dimethyl formamide is introduced. The reaction mixture is stirred overnight and the solvent is evaporated then in vacuo. The residue is suspended three times in 10 cm 3 of distilled water, each, the liquid is decanted, ahd the solid is sedimented by centrifuging.
- the secondary antibody is coupled to the carrier through the maleimide terminal groups of the side chains of the product obtained in step (f) as follows: 30 nanomoles of a product obtained in step (f) are solubilized in 1 cm 3 of an aqueous buffer comprising 150 mmoles of NaCI, 20 mmoles of Na 2 PO 4 and 1 mmole of EDTA (pH 6.5), and then 0.2 mg of Fab 1 secondary antibody are added. After 1-16 hours of incubation the product is separated by gel filtration.
- the brain slice treated with the sensor according to the invention is placed into a measuring chamber equipped with an optical microscope and ACSF is perfused above it at a rate of 4 cm 3 /minute.
- the SBFI dye is excited with a light 340 nm in wavelength, and the emitted light is detected at 525 nm with a high-speed CCD camera or with a scanning confocal laser microscope.
Abstract
The invention relates to a sensor of formula (I) for determining the concentrations of physiologically active inorganic ions on subcellular level wherein (H) is a silicon dioxide, noble metal or carbon carrier particle with an average diameter of 10-200 nm or a dendrimer with an average diameter of 10-200 nm optionally comprising dye molecules which are selectively sensitive to a physiologically active inorganic ion, A is a secondary antibody, X is the residue of a dye molecule selectively sensitive to a physiologically active inorganic ion, Y is the residue of a fluorescent marker molecule, mis 1-3, n is at least 10, but if (H) is a dendrimer, n may also be 0-9, p is zero or a positive number not exceeding n/10, L1 is a linker of the structure -F1-B-F2-, L2 is a linker of the structure -F1B'-F2, and L3 is a linker of the structure -F'1-B'-F'2-- The invention also relates to methods of preparing and use of the sensor.
Description
NANOSENSOR FOR DETERMINING THE CONCENTRATIONS OF PHYSIOLOGICALLY ACTIVE INORGANIC IONS ON SUBCELLULAR LEVEL
The invention relates to sensors applicable to determine the concentrations of physiologically active inorganic ions on subcellular level. The invention also relates to methods for preparing these sensors and to the use of the sensors for the above purpose.
The functioning of all living organisms is based on the separation of the intracellular region from its environment and on a precise regulation of the intra- and extracellular concentrations of compounds which participate in cell functions. Physiologically active inorganic ions (further on: physiological ions) play a key role in the regulation of cell functions. Na+ K+, Ca2+, H+, Cl" and HCO3 " ions regulate or initiate several processes which are vital for the appropriate functioning of cells. Na+ ions participate in both central and peripheral signal transduction processes, in mediating neuronal functions, in controlling cellular energy maintenance and in the formation of pain sensation, furthermore they have a central role in regulating heart function and blood pressure. K+ ions, which are present in higher concentrations in the intracellular space, exert their regulating functions mostly in parallel with those of Na+ ions which predominate in the extracellular region. Cl" ions have a central role in the inhibitory neural processes and, together with HCO3 " ions, exert important functions in regulating cell volume. Ca2+ ions play a central role, among others, in the functioning of smooth muscles and in the regulation of cellular signalling pathways and myocardial processes. Changes in H+ ion concentrations (i.e. in pH) influence among others neural conduction processes and Ca2+ homeostasis, and participate in the proper functioning of bone cells.
These processes proceed at well defined regions of the intracellular space or of the cell surface which are spatially well separated from one another, thus the knowledge of the local ion concentrations on subcellular level provides important pieces of information on the status of the processes regulated by them. These data are of great diagnostic value. Just to mention as an example, numerous diseases, such as Alzheimer disease, sclerosis multiplex and ischaemia may be traced back to disturbances in Ca2+ homeostasis.
Fluorescence measurements utilizing ion selective organic dyes have become increasingly widespread in determining physiological ion concentrations in biological systems [Meier et al: J. Neurosci. Methods 155, 251-259 (2006); Chatton et al: Proc. Natl. Acad. Sci. USA 100, 12456-12461 (2003); Lo et al: Biophys. J. 90, 357-365 (2006)]. These measurements are performed by adding an organic dye to the biological system which selectively binds the ion in question, and measuring the intensity of fluorescent light emitted by the dye molecules upon excitation. Upon binding the ions, the intensity of the light emitted by the dye molecule changes proportionally to the ion concentration, which enables the concentration to be calculated. Recently numerous ion selective dyes are commercially available [Minta et al: J. Biol. Chem. 264, 19449-19457 (1989); Baron et al: J, Am. Soc. Nephrol. ^6, 3490-3497 (2005); Fiacco et al: Neuron. 54, 611-626 (2007); Heimlich et al: J. Biol. Chem. 281, 2232-2241 (2006)], which enable the determination of physiological ions within wide concentration ranges.
In such measurements the ion selective dye, depending on its chemical and physical properties, enters either the extracellular or the intracellular space and distributes there almost evenly. Consequently, with ion selective dyes only the average ion concentration can be determined in the space concerned, and no information can be obtained on the ion concentration present at the region of the cell surface or of the intracellular space where the biological process actually takes place. Although these average values do have scientific and diagnostic value, much valuable pieces of information would be obtainable in the knowledge of the ion concentration prevailing at the actual place of the biological process.
In principle, dyes could be targeted with antibodies, because, depending on the dimension ratios, 3-6 dye molecules can be coupled to an antibody without affecting its targeting properties. This method has been successfully applied in targeting various dyes of high quantum yield which emit a very intense fluorescent light upon unit exciting energy, and in targeting quantum dots which produce even more intense signals [Kim et al: Anal. Chim. Acta 163-170 (2006); Kaul et al: Biochem. Cell. Biol. 133-140 (2007); Horwath et al: Proc. Natl. Acad. Sci. USA 7583-7588 (2005)]. Fluorescent markers targeted by this method are, however,
insensitive to the changes which occur in their environment (among others, to the concentration of physiological ions and to its variation); their signal intensity depends solely on the intensity of the exciting light. Thus this method is well applicable to label specific cell parts e.g. for anatomic purposes, but it does not give information on the functioning of the labelled parts. This method is inapplicable for ion selective dyes, which are typical representatives of molecules with low quantum yield producing no detectable signal in a concentration which can be targeted with antibodies (3-6 molecules for one antibody).
Further difficulties arise from the fact that the fluorescent marker should always be bound to an antibody capable to attach to the cell part concerned, which means that no universally applicable reagent can be produced which could be rendered suitable for the examination of any desired cell part by simple subsequent treatment steps.
Our aim was to provide a sensor which enables the subcellular targeting of ion selective dyes in amounts which produce a detectable signal, and, upon a simple subsequent treatment, can be directed to any desired target. These aims can be fully met with a sensor wherein the molecules of the ion selective dye are bound to a carrier and/or incorporated into a carrier, and at least one secondary antibody and optionally one or more fluorescent marker(s) is(are) bound to the sensor.
Based on the above, the invention relates to a sensor for determining the concentrations of physiologically active inorganic ions on subcellular level. The sensor according to the invention corresponds to formula (I)
wherein
( H J is a silicon dioxide, noble metal or carbon carrier particle with an average diameter of 10-200 nm or a dendrimer with an average diameter of 10-200 nm
optionally comprising dye molecules which are selectively sensitive to a physiologically active inorganic ion,
A is a secondary antibody,
X is the residue of a dye molecule selectively sensitive to a physiologically active inorganic ion,
Y is the residue of a fluorescent marker molecule, m is 1-3, n is at least 10, but if (R) is a dendrimer, n may also be 0-9, p is zero or a positive number not exceeding n/10,
L1 is a linker of the structure -F1-B-F2-,
L2 is a linker of the structure -FyB'-F^-, and
L3 is a linker of the structure -F"rB"-F"2-, wherein
F1, F1., and F", represent residues of functional groups on the carrier and may be the same or different,
B, B' and B" represent 1-10 membered alkyl chains optionally having a chain complement on their part attached to F1, F', or F", and may be the same or different,
F2 is a functional group coupling dye molecule residue X to alkyl chain B, F'2 is a functional group coupling secondary antibody A to alkyl chain B', and F"2 is a functional group coupling fluorescent marker molecule residue Y to alkyl chain B".
Thus, in the sensor according to the invention the ion selective dye molecules are bound by covalent bonds to the surface of the carrier when the carrier is silicon dioxide, a noble metal or carbon, or are bound by covalent bonds to the surface of the carrier and/or are physically bound in the hollows of the carrier when the carrier is a dendrimer [for the preparation of dendrimers see e.g. Grayson et al: Chem. Rev. 101, 3819-3867 (2001 ); Crespo et al: Chem. Rev. ^05, 1663- 1681 (2005); Hwang et al: JACS 128, 7505-7509 (2006)]. The carrier holds at least 10 ion selective dye molecules (n is at least 10). The upper limit of the number of ion selective dye molecules bound to or incorporated into the carrier is not decisive and depends practically on the particle size of the carrier and on the number of functional groups on the carrier. It is preferred to attach as many ion selective dye
molecule to a carrier nanoparticle as possible, because in this way the targeted sensor would produce a more intense signal.
The particle size of the carrier is preferably 20-150 nm, more preferably 50- 100 nm.
Upon an appropriate combination of the building blocks of linker L1 any desired ion selective dye molecule can be attached to the silicon dioxide, noble metal, carbon or dendrimer carrier. The formation of linker L1 is described in more detail when discussing the preparation of the sensor.
The term "ion selective dye molecule" or "dye molecule selective to a physiological ion" encompasses not only dye molecules which react to a single ion type (e.g. only to Na+ or only to K+ ions) with a concentration-dependent change in fluorescence, but also covers those which give such a reaction with more than one ion type but react to one of the ion types with a fluorescence change of at least threefold intensity. Obviously, it is preferred to use dye molecules with the highest possible selectivity. A broad choice of such dye molecules is known from the literature. Examples of Na+ selective dye molecules are those sold under the trade names SBFI, Sodium Green and CoroNa Green.
A second important characteristic of the sensor according to the invention is that it has 1-3 (preferably only 1) secondary antibody bound to the carrier with a covalent bond. In harmony with the literature, the term "secondary antibody" refers to an antibody fragment which recognizes the conservative region of all of the antibodies of a given species (human, monkey, rat, etc.). These secondary antibodies are known; of them the rat-specific Fab' antibody is mentioned as an example. The universal applicability of the sensor according to the invention is provided just by the fact that it contains a secondary antibody and not an antibody itself which performs targeting (further on: primary antibody). Due to the presence of the secondary antibody the once produced and marketed sensor can be coupled before use to any primary antibody which corresponds to the cell region to be examined, and the sensor is targeted by this latter primary antibody.
The architecture of the nanosensor according to the invention wherein all of the ion selective dye molecules are bound to the surface of the carrier and the way of targeting it to a particular site is shown in Fig. 1.
In some instances it is advisable to couple a fluorescent marker molecule to the carrier in order to ascertain before starting the determination of the ion concentration whether the sensor has reached the target. Fluorescent marker molecules already mentioned at the description of the state of art which produce a fluorescent signal with an intensity independent of the concentration of the surrounding ions can be used for this purpose. These fluorescent marker molecules are also termed as marker dyes. It is preferred to use marker dyes which have a greater quantum yield than the ion selective dye. In order to make the signal of the marking dye clearly distinguishable from the signal of the ion selective dye it is preferred to use a marking dye/ion selective dye pair which emit fluorescent light at different wavelengths.
If the marker dye is available as one bound to the appropriate primary antibody one can also proceed so that the sensor is treated before use with this marker dye/primary antibody complex instead of the targeting primary antibody. In this instance the presence of a marker dye in the sensor according to the invention may be unnecessary.
The sensors according to the invention are prepared as follows: (a) when the carrier is silicon dioxide, a noble metal or carbon, fragment -F1-B-Z of linker L1, fragment -FyB'-Z' of linker L2 and optionally fragment -F"rB"-Z" of linker L3 (in these formulae Z, Z' and Z" represent functional groups which are precursors of the F2, F'2 and F"2 moieties, respectively, and the other symbols are as defined above) are built up on the functional groups of the carrier by methods known per se, and the resulting product is reacted with a compound of formula R-X, with a compound of formula R'-A and optionally with a compound of formula R"-Y (in these formulae R is a functional group which, when reacted with Z, forms the F2 moiety, R' is a functional group which, when reacted with Z1, forms the F2 moiety, and R" is a functional group which, when reacted with Z", forms the F"2 moiety and the other symbols are as defined above); or
(b) when the carrier is a dendrimer, fragment -FVB'-Z1 of linker L2, optionally fragment -F1-B-Z of linker L1, and optionally fragment -F"rB"-Z" of linker L3 (in these formulae Z, Z1 and Z" represent functional groups which are precursors of the F2, F2 and F"2 moieties, respectively, and the other symbols are as defined above) are built up by methods known per se on the functional groups of the carrier which optionally comprises dye molecules selective to physiological ions, and the resulting product is reacted with a compound of formula R'-A, optionally with a compound of formula R-X and optionally with a compound of formula R"-Y (in these formulae R is a functional group which, when reacted with Z, forms the F2 moiety, R' is a functional group which, when reacted with Z', forms the F2 moiety, and R" is a functional group which, when reacted with Z", forms the F"2 moiety and the other symbols are as defined above).
The so-called Stober synthesis is a well known method for producing silicon dioxide carriers, which enables one to produce particles of various size over a broad scale of the nanometer range (between 20 nm and 200 nm) as stable sols in aqueous or alcoholic media. This method is particularly preferable also because the size of the resulting particles is easy to control and the surface of the particles can be easily reacted with reactants capable of forming the required functional groups [Kazakevich et al: Langmuir 18, 3117-3122 (2002)].
The surface functional groups of colloidal silicon dioxide particles are the -OH groups bound to silicon atoms (for this instance the F1, F^ and F^ moieties in linkers L1, L2 and L3 are the same). These hydroxy groups can be silanylated very easily with compounds of the formula Si(OEt3)-B-Z, such as with 3-amino-propyl- triethoxysilane (Et = ethyl, B = propylene, Z = NH2) or with cyanoethyl-triethoxy- silane (Et = ethyl, B = ethylene, Z = CN) [see e.g. Plueddmann et al: Silane coupling agents 2nd ed.; Plenum Press, New York, 1991]. In this reaction, depending on whether a single reactant or more than one reactants were used, side chains of the formula -O-Si-B-Z (and optionally -O-Si-B'-Z' and/or -O-Si-B"-Z") are formed on the surface of the carrier; thus in this instance the B moieties (and the B' and/or B" moieties if present) are coupled to the residues of the functional groups on the carrier [F1, FY F\; for this instance -O-] through chain complement -Si-. As it has been mentioned before, alkyl chains B, B1 and B" are 1-10 membered alkyl chains,
which means that 1-10 carbon atoms are located between moiety F1 (plus the chain complement) and moiety F2. The alkyl chains may be optionally branched. Alkyl chain B, which is a member of the linker to the ion selective dye molecule, is preferably a 2-6 membered one; alkyl chain B", which is a member of the linker to the marker dye (if present), may be of similar size. Alkyl chain B1, which is a member of the linker to the secondary antibody, is preferably longer than alkyl chain B and/or B".
If the terminal group of the thus-formed side chain is not yet suitable for direct reaction with the secondary antibody and/or with the various dye molecules or with the reactive derivatives of these substances, the terminal group is converted into a functional group capable for such reactions by methods known per se. Thus e.g. a terminal -CN group can be converted into a carboxy group by hydrolysis, or a terminal amino group can be converted into a maleimide group for reaction with the secondary antibody.
The side chains can be formed on the surface of the carrier in a single step or in more consecutive steps. The consecutive reactions can also be performed as a one-pot synthesis. Thereafter the carrier with the desired side chains is reacted with a reactive derivative of the ion selective dye, with a reactive derivative of the secondary antibody, and optionally with a reactive derivative of the marker dye. These reactions can also be performed in a single step or in more steps.
The term "reactive derivative" as used in the previous paragraph refers to either the entities to be coupled (dye molecules, secondary antibody) if they do contain functional groups, or to reactive compounds formed therefrom by previous functionalization. The secondary antibody can be reacted directly with certain functional groups (e.g. maleimide or thio groups). However, certain dye molecules should be functionalized first to introduce groups R and R" capable of reacting with groups Z and Z" of the side chains on the carrier As an example, SBFI of formula (II) (a Na+-selective dye) can be subjected to partial hydrolysis to convert one of the acetyl groups into hydroxy group which is now capable to react with the carboxy terminal groups of the side chain on the carrier. Similarly, the carboxy group of
Alexa Fluor 488 (a marker dye) can be converted into acyl chloride group in order to increase its reactivity for reactions with amino, hydroxy or carboxy terminal groups.
It is to be mentioned here that although the carrier-side members of linkers L1, L2 and L3 (i.e. moieties F1, P1 and F",) are usually the same, it is not excluded that these members differ from one another. The various methods applicable for preparing the carrier (particularly when the carrier is a noble metal to be described in more detail later on) may give rise to the formation of such starting substances. In such instances the different side chains are formed on the carrier in separate steps.
It is also to be mentioned that linkers L1, L2 and L3, furthermore side chains -F1-B-Z, -FyB'-Z' and -F"rB"-Z" leading to their formation, may be the same or different. When all the three side chains and/or linkers (or two of them) are the same, carefully selected reagent ratios and accurately controlled reaction conditions are required in order to produce particles comprising moieties X, A (and optionally Y) in the desired ratio. Therefore it is more appropriate to form side chains wherein at least terminal groups Z and Z' differ from one another (consequently in the resulting sensor L1 and L2 will also be different).
Numerous methods are available for the preparation of noble metal nano- particles applicable as carriers. According to a frequently used method trivalent gold compounds (such as HAuCI4) can be reduced in a citrate-containing aqueous solution to form carriers with a particle size of 16-147 nm, the actual particle size being dependent on the reducing agent/stabilizing agent concentration ratio [Turkevitch et al: Discuss. Faraday Soc. IJ., 55-75 (1951 ); Frens: Nature Phys. Sci.
241 , 20-22 (1973)]. Production of mercapto-stabilized gold particles is also rather widespread; in this instance the particle size depends on the gold/stabilizing ligand concentration ratio [Yonezawa et al: Physico-chem. Eng. Asp. 149, 193-199 (1999)]. Over or instead of mercapto ligands numerous amphiphilic molecules have also been studied for stabilizing gold particles [Daniel et al: Chem. Rev. 104, 293- 346 (2004)]. The ligands of the nanoparticle, such as thiolates when gold particle is stabilized with an alkane thiolate, can be replaced by other tiols. The rate of this replacement process depends on the chain length [Hostetler et al: Langmuir 1.5, 3782-3789 (1999)], on the types of the exiting and entering thiols [Montalti et al: Langmuir 19, 5171-5174 (2003)], on the charge of the nanoparticle [Song et al: J. Am. Chem. Soc. 124, 7096-7102 (2002)] and on the oxidation processes [Pasquato et al: Chem. Commun. 2253-2254 (2000)]. The last step is a change in the functional terminal groups of the stabilizing agent for the nanoparticle. Peptid bond formation or nucleophilic substitution reactions may proceed on the surface [Pasquato et al. loc. cit.; Templeton et al. loc. cit.]. A characteristic feature of the reactions proceeding on nanoparticles is that the reactivity of the thin thiol layer which covers the strongly curved surface differs from that appearing on a plane surface. This effect can be utilized to perform organic reactions (such as SN2 type reactions) on the surface of the nanoparticle which cannot proceed on a plane surface due to steric hindrance.
As it appears from the above, the side chains formed on a noble metal carrier comprise most frequently thiol groups as F1, Z, Z' and/or Z" moieties, and the side chains differ from one another most frequently in the number of the members of alkyl chains B, B' and B". Thiol groups can be reacted usually directly with secondary antibodies, whereas the dye molecules comprising groups X and Y are usually to be be converted into reactive forms by appropriate derivatization steps.
Carbon nanotubes are characteristic representatives of carbon carriers. Direct oxidation of the carbon atoms on their outer surface is the simplest way of their chemical modification. The surface functional groups can be converted easily into other groups, e.g. they can be activated with thionyl chloride and esterified then with octadecanol [Hammon et al: Appl. Phys. A, Materials Science & Processing
74, 333 (2002)]. These reactions can be utilized to advantage to bind dye molecules and secondary antibodies to carbon carriers.
Methods for preparing dendrimers, e.g. those referred to above, can be easily completed at an appropriate stage with the introduction of dye molecules selective to physiological ions. Side chains for coupling secondary antibodies and optionally further (ion selective and/or marker) dye molecules can be formed on the surfaces of the resulting dendrimers by methods discussed above. It should be noted here that dendrimers comprising no ion selective dye molecules in their hollows can also be utilized as carriers. For these carriers n must be at least 10.
The sensor according to the invention is utilized for determining the concentrations of physiological ions in biological samples by conventional fluorescent measurement techniques (measurement of the starting fluorescence, adding to a biological sample, measurement of the final fluorescence) with the difference that a primary antibody which targets the sensor according to the invention to the cell region to be examined is also added to the biological sample. As it has been discussed above, primary antibodies carrying fluorescent marker dye molecules can also be used for this purpose. The sensor according to the invention is treated with the primary antibody preferably before adding it to the biological sample.
Further details of the invention are presented below by the aid of an example which describes the preparation and use of a sensor comprising silicon dioxide as carrier.
EXAMPLE
(a) Synthesis of SiO2 nanoparticles with a diameter of 20 nm: 5 cm of 25 % aqueous ammonia are admixed with 250 cm of 99.7 % ethanol. The mixture is stirred at room temperature for 15 minutes, thereafter 10 cm3 of 98 % tetraethyl orthosilicate are added, and the resulting mixture is stirred at room temperature for 8 hours. The excess of ammonia is removed by distillation (completion of removal is checked by pH measurement). A stable colloidal system is obtained, which is subjected to evaporation under mild conditions avoiding
boiling. In this way 2.50 g of colloidal SiO2 (a so-called colloidal dry substance) are obtained.
(b) Formation of side chains with amino and cyano terminal groups on the surface of the nanoparticles:
2.50 g of dry colloidal SiO2 are dispersed at room temperature in 250 cm3 of 98 % acetonitrile. A solution of 560 μl of 98 % 3-aminopropyl-triethoxysilane and 580 μl of 96 % 2-cyanoethyl-triethoxysilane in 10 cm3 of acetonitrile is added to the colloidal system at room temperature. The mixture is warmed to 500C and stirred at this temperature for one hour. At the end of the reaction the mixture is evaporated under mild conditions to obtain the colloidal SiO2 modified with two types of side chains [-O-Si-(CH2)3-NH2 and -O-Si-(CH2)2-CN] as a solid substance.
(c) Conversion of cyano terminal groups into carboxy terminal groups: The resulting colloidal SiO2 with modified surface is dispersed in 100 cm3 of distilled water and 100 cm3 of 10 % aqueous sulfuric acid solution are added. The mixture is boiled for 1 hour and then evaporated at 700C. 2.0 g of colloidal SiO2, modified with two types of side chains [-O-Si-(CH2)3-NH2 and -O-Si-(CH2)2-COOH], are obtained.
(d) Conversion of amino terminal groups into maleimide terminal groups: A mixture of 0.2 g of colloidal SiO2 with modified surface, prepared as described above, 0.3 g (3 mmoles) of maleic anhydride and 10 cm3 of chloroform is refluxed for 20 hours. Thereafter the mixture is filtered, the solid is washed with chloroform and dried in vacuo. 10 cm3 of acetic anhydride and 40 mg of sodium acetate are added to the resulting solid, and the suspension is intensely stirred for 30 minutes. The mixture is cooled to 40C, stirred for 4 hours, thereafter the solid product is filtered off and dried in vacuo. 0.22 g of a solid product are obtained, wherein the amino terminal groups of the side chains are replaced by maleimide terminal groups.
(e) Conversion of a Na+ selective dye into its reactive derivative:
0.25 cm3 of 0.1 N aqueous potassium hydroxide solution are added drpowise to a solution of 0.107 g (0.1 mmole) of SBFI dye of formula (II) in 10 cm3 of dioxane, and the resulting mixture is stirred at room temperature for 4 hours. Thereafter the mixture is neutralized to pH 7 with 1 N aqueous hydrochloric acid and evaporated in vacuo. 0.1 g of activated SBFI dye carrying hydroxy functional groups is obtained.
(f) Coupling of the dye molecules to the carrier:
The product obtained in step (e) is coupled to the -COOH terminal groups of the side chains of the product obtained in step (d) as follows: 0.5 cm3 of isobutyl chloroformate are added dropwise at O0C to a stirred suspension of 0.2 g of the product obtained in step (d) in 10 cm3 of dimethyl formamide, and the mixture is allowed to warm to room temperature. After 2 hours of stirring a solution of 0.1 g of the product obtained in step (e) in 5 cm3 of dimethyl formamide is introduced. The reaction mixture is stirred overnight and the solvent is evaporated then in vacuo. The residue is suspended three times in 10 cm3 of distilled water, each, the liquid is decanted, ahd the solid is sedimented by centrifuging. 0.3 g of a solid product are obtained, wherein the -O-Si-(CH2)2-COOH side chains of the carrier are replaced by -O-Si-(CH2)2-COO-SBFI side chains.
(g) Coupling of the secondary antibody:
The secondary antibody is coupled to the carrier through the maleimide terminal groups of the side chains of the product obtained in step (f) as follows: 30 nanomoles of a product obtained in step (f) are solubilized in 1 cm3 of an aqueous buffer comprising 150 mmoles of NaCI, 20 mmoles of Na2PO4 and 1 mmole of EDTA (pH 6.5), and then 0.2 mg of Fab1 secondary antibody are added. After 1-16 hours of incubation the product is separated by gel filtration.
(h) Treatment of the sensor with a primary antibody: 1 μg of the antibody specific to ankyringG protein localized on the axon hillock of rat brain [Zhou et al: J. Cell. Biol. 143, 1295-1304 (1998)] is dissolved in 5 μl of PBS, and this solution is added to the sensor according to the invention obtained in step (g). The mixture is maintaned at room temperature for 10 minutes, thereafter 10 μl of a blocking reagent is added, and the antibody complex of the
sensor according to the invention is separated from the non-bound components by column chromatography.
(i) Determination of the concentration of /Va+ ions in rat brain slice: 300 μm thick hippocampal slices are excised from brains of 9-15 days old male rats stored at 40C in an artificial cerebrospinal fluid (ACSF). The slices are incubated for 1 hour at 370C under carbogenic atmosphere in an interface type chamber comprising ACSF buffer. Thereafter 200 μl of ACSF buffer comprising 30 μg of the product obtained in step (h) are added to the slices, and incubation is continued for an additional hour.
The brain slice treated with the sensor according to the invention is placed into a measuring chamber equipped with an optical microscope and ACSF is perfused above it at a rate of 4 cm3/minute. The SBFI dye is excited with a light 340 nm in wavelength, and the emitted light is detected at 525 nm with a high-speed CCD camera or with a scanning confocal laser microscope.
With this method the activation of Na+ ion channels, which are concentrated in an extremely high number at the axon hillock, can be well detected.
Claims
1. A sensor of formula (I) for determining the concentration of physiologically active inorganic ions at subcellular levels
(HJ is a silicon dioxide, noble metal or carbon carrier particle with an average diameter of 10-200 nm or a dendrimer with an average diameter of 10-200 nm optionally comprising dye molecules which are selectively sensitive to a physiologically active inorganic ion,
A is a secondary antibody,
X is the residue of a dye molecule selectively sensitive to a physiologically active inorganic ion,
Y is the residue of a fluorescent marker molecule, m is 1-3, n is at least 10, but if (hi) is a dendrimer, n may also be 0-9, p is zero or a positive number not exceeding n/10,
L1 is a linker of the structure -F1-B-F2-,
L2 is a linker of the structure -F'rB'-F'2-, and
L3 is a linker of the structure -FVB"-F"2-, wherein
F1, F'Ϊ and F\ represent residues of functional groups on the carrier and may be the same or different,
B, B' and B" represent 1-10 membered alkyl chains optionally having a chain complement on their part attached to F1, F^ or P1 and may be the same or different,
F2 is a functional group coupling dye molecule residue X to alkyl chain B, F2 is a functional group coupling secondary antibody A to alkyl chain B', and F"2 is a functional group coupling fluorescent marker molecule residue Y to alkyl chain B".
2. A method for preparing a sensor according to claim 1 , characterized in that
(a) when the carrier is silicon dioxide, a noble metal or carbon, fragment -F1-B-Z of linker L1, fragment -F'rB'-Z' of linker L2 and optionally fragment -F"rB"-Z" of linker L3 (in these formulae Z, Z' and Z" represent functional groups which are precursors of the F2, F'2 and F"2 moieties, respectively, and the other symbols are as defined in claim 1) are built up on the functional groups of the carrier by methods known per se, and the resulting product is reacted with a compound of formula R-X, with a compound of formula R'-A and optionally with a compound of formula R"-Y (in these formulae R is a functional group which, when reacted with Z, forms the F2 moiety, R' is a functional group which, when reacted with Z', forms the F'2 moiety, and R" is a functional group which, when reacted with Z", forms the F"2 moiety and the other symbols are as defined in claim 1); or
(b) when the carrier is a dendrimer, fragment -FyB'-Z' of linker L2, optionally fragment -F1-B-Z of linker L1, and optionally fragment -F"rB"-Z" of linker L3 (in these formulae Z, Z' and Z" represent functional groups which are precursors of the F2, F'2 and F"2 moieties, respectively, and the other symbols are as defined in claim 1 ) are built up by methods known per se on the functional groups of the carrier which optionally comprises dye molecules selective to physiological ions, and the resulting product is reacted with a compound of formula R'-A, optionally with a compound of formula R-X and optionally with a compound of formula R"-Y (in these formulae R is a functional group which, when reacted with Z, forms the F2 moiety, R' is a functional group which, when reacted with Z', forms the F'2 moiety, and R" is a functional group which, when reacted with Z", forms the F"2 moiety and the other symbols are as defined in claim 1 ).
3. Use of a sensor according to claim 1 to determine the concentration of physiologically active inorganic ions at subcellular levels, wherein a sensor according to claim 1 is added to the biological sample in combination with a primary antibody which is specific to the subcellular cell region to be examined, and then the concentration of the inorganic ion in question at the subcellular cell region is determined by measuring the intensity changes in fluorescence.
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
HUP0800428 | 2008-07-14 | ||
HU0800428A HUP0800428A2 (en) | 2008-07-14 | 2008-07-14 | Nanosensor for determining the concentration of physiologically active inorganic ions on subcellular level |
Publications (1)
Publication Number | Publication Date |
---|---|
WO2010007451A1 true WO2010007451A1 (en) | 2010-01-21 |
Family
ID=89988385
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/HU2008/000109 WO2010007451A1 (en) | 2008-07-14 | 2008-09-29 | Nanosensor for determining the concentrations of physiologically active inorganic ions on subcellular level |
Country Status (2)
Country | Link |
---|---|
HU (1) | HUP0800428A2 (en) |
WO (1) | WO2010007451A1 (en) |
Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20060148104A1 (en) * | 2004-10-29 | 2006-07-06 | Massachusetts Institute Of Technology | Detection of ion channel or receptor activity |
WO2008016646A2 (en) * | 2006-07-31 | 2008-02-07 | The Charles Stark Draper Laboratory, Inc. | Quantum dot based fluorescent ion-sensor |
-
2008
- 2008-07-14 HU HU0800428A patent/HUP0800428A2/en not_active Application Discontinuation
- 2008-09-29 WO PCT/HU2008/000109 patent/WO2010007451A1/en active Application Filing
Patent Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20060148104A1 (en) * | 2004-10-29 | 2006-07-06 | Massachusetts Institute Of Technology | Detection of ion channel or receptor activity |
WO2008016646A2 (en) * | 2006-07-31 | 2008-02-07 | The Charles Stark Draper Laboratory, Inc. | Quantum dot based fluorescent ion-sensor |
Non-Patent Citations (2)
Title |
---|
THOMAS T P ET AL: "IN VITRO TARGETING OF SYNTHESIZED ANTIBODY-CONJUGATED DENDRIMER NANOPARTICLES", BIOMACROMOLECULES, ACS, WASHINGTON, DC, US, vol. 5, 1 January 2004 (2004-01-01), pages 2269 - 2274, XP001222012, ISSN: 1525-7797 * |
ZHAROV VLADIMIR P ET AL: "Synergistic enhancement of selective nanophotothermolysis with gold nanoclusters: potential for cancer therapy.", LASERS IN SURGERY AND MEDICINE SEP 2005, vol. 37, no. 3, September 2005 (2005-09-01), pages 219 - 226, XP002512047, ISSN: 0196-8092 * |
Also Published As
Publication number | Publication date |
---|---|
HUP0800428A2 (en) | 2010-04-28 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
Ding et al. | Gold nanocluster-based fluorescence biosensor for targeted imaging in cancer cells and ratiometric determination of intracellular pH | |
Caro et al. | Silver nanoparticles: sensing and imaging applications | |
EP2855360B1 (en) | Surface enhanced raman spectroscopy (sers) marker conjugates and methods of their preparation | |
GB2474456A (en) | Dendrimer functionalised nanoparticle label | |
Achatz et al. | Colloidal silica nanoparticles for use in click chemistry-based conjugations and fluorescent affinity assays | |
Ji et al. | Dual-emissive near-infrared carbon dot-based ratiometric fluorescence sensor for lysozyme | |
JP4444502B2 (en) | Nucleic acid sequence identification | |
KR102257511B1 (en) | Magnetic-Optical Composite Nanoparticles | |
JP2010210630A (en) | Method of labeling phosphorylated peptide | |
Korzeniowska et al. | Intracellular pH-sensing using core/shell silica nanoparticles | |
Hartati et al. | A voltammetric immunosensor based on gold nanoparticle-Anti-ENaC bioconjugate for the detection of epithelial sodium channel (ENaC) protein as a biomarker of hypertension | |
Hameed et al. | Efficient synthesis of amino acids capped gold nanoparticles from easily reducible aryldiazonium tetrachloroaurate (III) salts for cellular uptake study | |
Lv et al. | A gold nanoparticle based colorimetric and fluorescent dual-channel probe for acetylcholinesterase detection and inhibitor screening | |
JP5521188B2 (en) | Sensing chip, manufacturing method thereof and use thereof | |
Li et al. | Fluorescent enzyme-linked immunosorbent assay based on alkaline phosphatase-responsive coordination polymer composite | |
WO2020075879A1 (en) | Raman-active nanoparticle and method for producing same | |
CN110655510B (en) | Sulfite ratiometric fluorescent probe targeting lipid droplets and application thereof | |
CN110218215B (en) | Application of two-photon ratio type fluorescent probe in detection of monoamine oxidase B | |
WO2010007451A1 (en) | Nanosensor for determining the concentrations of physiologically active inorganic ions on subcellular level | |
CN114739976A (en) | SERS probe biosensor and preparation method and application method thereof | |
KR102309495B1 (en) | Nanowire-based immunofluorescence kits for the detection of severe acute respiratory syndrome coronavirus 2 antibodies and uses thereof | |
JP2016531297A (en) | Diagnostic device for detection of disease-related target structures | |
TW201043960A (en) | Sensing platform | |
CN111647407A (en) | Preparation method of ratiometric fluorescent probe for detecting cefalexin residues, fluorescent probe prepared by same and application of ratiometric fluorescent probe | |
Cui et al. | A ratiometric fluorescent nanoprobe for ultrafast imaging of peroxynitrite in living cells |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
121 | Ep: the epo has been informed by wipo that ep was designated in this application |
Ref document number: 08806832 Country of ref document: EP Kind code of ref document: A1 |
|
NENP | Non-entry into the national phase |
Ref country code: DE |
|
122 | Ep: pct application non-entry in european phase |
Ref document number: 08806832 Country of ref document: EP Kind code of ref document: A1 |